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Summary
Analysis summary
Summary:
The raw bam files, one for each RNA-Seq sample, were summarized to an exon read counts table, using the Bioconductor package GenomicRanges. In the final read counts table, each row represented one exon, each column one RNA-Seq sample and each cell, the corresponding read counts associated with each row and column.The exon read counts were filtered for artifacts that could affect the subsequent normalization and statistical testing procedures as follows: if an annotated gene had up to 5 exons, read presence was required in at least 2 of the exons, else if an annotated gene had more than 5 exons, then read presence was required in at least 0.2x⌈E⌉ exons, where ⌈.⌉ is the ceiling mathematical function. The application of this filter resulted in the exclusion of 6771 genes from further analysis. The total number of genes excluded due to the application of exon filters was 6771. The final read counts for each gene model were calculated as the sums of their exon reads, creating a gene counts table where each row corresponded to an Ensembl gene model and each column corresponded to an RNA-Seq sample. The gene counts table was normalized for inherent systematic or experimental biases (e.g. sequencing depth, gene length, GC content bias etc.) using the Bioconductor package edgeR after removing genes that had zero counts over all the RNA-Seq samples (4605 genes). The output of the normalization algorithm was a table with normalized counts, which can be used for differential expression analysis with statistical algorithms developed specifically for count data. Prior to the statistical testing procedure, the gene read counts were filtered for possible artifacts that could affect the subsequent statistical testing procedures. Genes presenting any of the following were excluded from further analysis: i) genes with length less than 500 (508 genes), ii) genes whose average reads per 100 bp was less than the 25th quantile of the total normalized distribution of average reads per 100bp (0 genes with cutoff value 0.72037 average reads per 100 bp), iii) genes with read counts below the median read counts of the total normalized count distribution (8373 genes with cutoff value 275.5 normalized read counts). The total number of genes excluded due to the application of gene filters was 4510. The total (unified) number of genes excluded due to the application of all filters was 12996. The resulting gene counts table was subjected to differential expression analysis for the contrasts sample005 versus sample006 using the Bioconductor packages DESeq, edgeR, NOISeq. In order to combine the statistical significance from multiple algorithms and perform meta-analysis, the PANDORA weighted p-value across results method was applied. The final numbers of differentially expressed genes were (per contrast): for the contrast sample005 versus sample006, 2335 (411) statistically significant genes were found with a p-value (FDR or adjusted p-value) threshold of 0.05 and of these, 751 (140) were up-regulated, 1002 (271) were down-regulated and 582 (0) were not differentially expressed according to an absolute fold change cutoff value of 1 in log2 scale. Literature references for all the algorithms used can be found at the end of this report.
Read counts file: imported sam/bam/bed files
Conditions: sample005, sample006
Samples included: sample005, sample006
Samples excluded:
none
Requested contrasts: sample005_vs_sample006
Library sizes:
- sample005: 27305377
- sample006: 21399230
Annotation: download
Organism: human ( Homo sapiens), genome version alias hg19
Annotation source: UCSC genomes database
Count type: exon
Exon filters:
min.active.exons - min.active.exons
- exons.per.gene: 5
- min.exons: 2
- frac: 0.2
Gene filters:
length, avg.reads, expression, out.list - avg.reads
- average.per.bp: 100
- quantile: 0.25
- expression
- median: TRUE
- mean: FALSE
- quantile: NA
- known: NA
- custom: NA
Filter application: after normalization
Normalization algorithm: edgeR
Normalization arguments:
method, refColumn, logratioTrim, sumTrim, doWeighting, Acutoff, p - method: TMM
- logratioTrim: 0.3
- sumTrim: 0.05
- doWeighting: TRUE
- Acutoff: -1e+10
- p: 0.75
Statistical algorithm(s): DESeq, edgeR, NOISeq
Statistical arguments for DESeq: method, sharingMode, fitType - method: blind
- sharingMode: fit-only
- fitType: local
Statistical arguments for edgeR: main.method, rowsum.filter, prior.df, trend, span, tag.method, grid.length, grid.range, offset, glm.method, subset, AveLogCPM, trend.method, dispersion, offset, weights, lib.size, prior.count, start, method, test, abundance.trend, robust, winsor.tail.p - main.method: classic
- rowsum.filter: 5
- prior.df: 10
- trend: movingave
- tag.method: grid
- grid.length: 11
- grid.range: -6, 6
- glm.method: CoxReid
- subset: 10000
- trend.method: auto
- prior.count: 0.125
- method: auto
- test: chisq
- abundance.trend: TRUE
- robust: FALSE
- winsor.tail.p: 0.05, 0.1
Statistical arguments for NOISeq: k, norm, replicates, factor, conditions, pnr, nss, v, lc, nclust, r, adj, a0per, filter, depth, cv.cutoff, cpm - k: 0.5
- norm: n
- replicates: biological
- factor: class
- pnr: 0.2
- nss: 5
- v: 0.02
- lc: 1
- nclust: 15
- r: 100
- adj: 1.5
- a0per: 0.9
- filter: 0
- cv.cutoff: 500
- cpm: 1
Meta-analysis method: PANDORA weighted p-value across results
Multiple testing correction: Benjamini-Hochberg FDR
p-value threshold: 0.05
Logarithmic tranformation offset: 1
Analysis preset: not available
Quality control plots: multidimensional scaling, biotype detection, biotype counts, sample and biotype saturation, RNA composition, boxplots, GC-content bias, transcript length bias, mean-difference plot, mean-variance plot, DEG heatmap, volcano plot, DEG biotype detection, filtered biotypes
Figure format: png, pdf
Output directory: metaseqR-out
Output data: Annotation, p-value, Fold change, Statistics, Read counts
Output scale(s): Natural scale, log2 scale
Output values: Raw values, Normalized values
Output statistics: Mean, Standard deviation, Coefficient of Variation, Robust Coefficient of Variation
Total run time: 03 days 05 hours 32 minutes 20 seconds
Filtered genes
Number of filtered genes: 12996 which is the union of
- Filtered because of zero reads: 4605
-
Filtered because of exon filters: 6771
which is the union of
-
Filtered because of gene filters: 8384
which is the union of
- length: 508 genes with filter cutoff value 500
- avg.reads: 4001 genes with filter cutoff value 0.7203746
- expression: 8373 genes further decomposed to (filter name, filtered genes, filter cutoff):
- median: 8373 genes with filter cutoff value 275.5
Differentially expressed genes
Number of differentially expressed genes per contrast:
- sample005_vs_sample006: 2335 (411) statistically significant genes of which 751 (140) up regulated, 1002 (271) down regulated and 582 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale. These numbers refer to the combined analysis performed by metaseqR. Per statistical algorithm, the differentially expressed genes are:
- DESeq: 393 (18) statistically significant genes of which 130 (5) up regulated, 263 (13) down regulated and 0 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- edgeR: 2663 (1369) statistically significant genes of which 798 (584) up regulated, 1048 (785) down regulated and 817 (0) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
- NOISeq: 4479 (1121) statistically significant genes of which 787 (332) up regulated, 1034 (486) down regulated and 2658 (303) not differentially expressed according to a p-value (FDR or adjusted p-value) threshold of 0.05 and an absolute fold change cutoff value of 1 in log2 scale.
Run log[ 2018-03-09 17:05:47 ] FATAL Condition names in sample list and contrast list do not match! Check if the contrasts follow the appropriate format (e.g. "_vs_" separating contrasting conditions... [ 2018-03-09 17:06:52 ] INFO 2018-03-09 17:06:52: Data processing started... [ 2018-03-09 17:06:52 ] INFO Read counts file: imported sam/bam/bed files [ 2018-03-09 17:06:52 ] INFO Conditions: sample005, sample006 [ 2018-03-09 17:06:52 ] INFO Samples to include: sample005, sample006 [ 2018-03-09 17:06:52 ] INFO Samples to exclude: none [ 2018-03-09 17:06:52 ] INFO Requested contrasts: sample005_vs_sample006 [ 2018-03-09 17:06:52 ] INFO Library sizes: [ 2018-03-09 17:06:52 ] INFO sample005: 27305377 [ 2018-03-09 17:06:52 ] INFO sample006: 21399230 [ 2018-03-09 17:06:52 ] INFO Annotation: download [ 2018-03-09 17:06:52 ] INFO Organism: hg19 [ 2018-03-09 17:06:52 ] INFO Reference source: ucsc [ 2018-03-09 17:06:52 ] INFO Count type: exon [ 2018-03-09 17:06:52 ] INFO Exon filters: min.active.exons [ 2018-03-09 17:06:52 ] INFO min.active.exons: [ 2018-03-09 17:06:52 ] INFO exons.per.gene: 5 [ 2018-03-09 17:06:52 ] INFO min.exons: 2 [ 2018-03-09 17:06:52 ] INFO frac: 0.2 [ 2018-03-09 17:06:52 ] INFO Gene filters: length, avg.reads, expression, out.list [ 2018-03-09 17:06:52 ] INFO length: [ 2018-03-09 17:06:52 ] INFO length: 500 [ 2018-03-09 17:06:52 ] INFO avg.reads: [ 2018-03-09 17:06:52 ] INFO average.per.bp: 100 [ 2018-03-09 17:06:52 ] INFO quantile: 0.25 [ 2018-03-09 17:06:52 ] INFO expression: [ 2018-03-09 17:06:52 ] INFO median: TRUE [ 2018-03-09 17:06:52 ] INFO mean: FALSE [ 2018-03-09 17:06:52 ] INFO quantile: NA [ 2018-03-09 17:06:52 ] INFO known: NA [ 2018-03-09 17:06:52 ] INFO custom: NA [ 2018-03-09 17:06:52 ] INFO out.list: [ 2018-03-09 17:06:52 ] INFO Filter application: postnorm [ 2018-03-09 17:06:52 ] INFO Normalization algorithm: edger [ 2018-03-09 17:06:52 ] INFO Normalization arguments: [ 2018-03-09 17:06:52 ] INFO method: TMM [ 2018-03-09 17:06:52 ] INFO logratioTrim: 0.3 [ 2018-03-09 17:06:52 ] INFO sumTrim: 0.05 [ 2018-03-09 17:06:52 ] INFO doWeighting: TRUE [ 2018-03-09 17:06:52 ] INFO Acutoff: -1e+10 [ 2018-03-09 17:06:52 ] INFO p: 0.75 [ 2018-03-09 17:06:52 ] INFO Statistical algorithm: deseq, edger, noiseq [ 2018-03-09 17:06:52 ] INFO Statistical arguments: [ 2018-03-09 17:06:52 ] INFO deseq: blind, fit-only, local [ 2018-03-09 17:06:52 ] INFO edger: classic, 5, 10, movingave, NULL, grid, 11, c(-6, 6), NULL, CoxReid, 10000, NULL, auto, NULL, NULL, NULL, NULL, 0.125, NULL, auto, chisq, TRUE, FALSE, c(0.05, 0.1) [ 2018-03-09 17:06:52 ] INFO noiseq: 0.5, n, biological, class, NULL, 0.2, 5, 0.02, 1, 15, 100, 1.5, 0.9, 0, NULL, 500, 1 [ 2018-03-09 17:06:52 ] INFO Meta-analysis method: pandora [ 2018-03-09 17:06:52 ] INFO Multiple testing correction: BH [ 2018-03-09 17:06:52 ] INFO p-value threshold: 0.05 [ 2018-03-09 17:06:52 ] INFO Logarithmic transformation offset: 1 [ 2018-03-09 17:06:52 ] INFO Quality control plots: mds, biodetection, countsbio, saturation, rnacomp, boxplot, gcbias, lengthbias, meandiff, readnoise, meanvar, readnoise, deheatmap, volcano, biodist, filtered [ 2018-03-09 17:06:52 ] INFO Figure format: png, pdf [ 2018-03-09 17:06:52 ] INFO Output directory: metaseqR-out [ 2018-03-09 17:06:52 ] INFO Output data: annotation, p.value, meta.p.value, adj.meta.p.value, fold.change, stats, counts [ 2018-03-09 17:06:52 ] INFO Output scale(s): natural, log2 [ 2018-03-09 17:06:52 ] INFO Output values: raw, normalized [ 2018-03-09 17:06:52 ] INFO Output statistics: mean, sd, cv, rcv [ 2018-03-09 17:06:52 ] INFO Downloading gene annotation for hg19... [ 2018-03-11 18:36:54 ] INFO Converting annotation to GenomicRanges object... [ 2018-03-11 18:36:57 ] INFO Getting DNA sequences... [ 2018-03-11 18:37:13 ] INFO Getting GC content... [ 2018-03-11 18:37:15 ] INFO Downloading exon annotation for hg19... [ 2018-03-11 19:09:16 ] INFO Converting annotation to GenomicRanges object... [ 2018-03-11 19:09:17 ] INFO Getting DNA sequences... [ 2018-03-11 19:09:20 ] INFO Getting GC content... [ 2018-03-11 19:09:22 ] INFO Converting annotation to GenomicRanges object... [ 2018-03-11 19:09:22 ] INFO Merging exons to create unique gene models... [ 2018-03-11 19:11:45 ] INFO Reading bam file 005.bam for sample with name sample005. This might take some time... [ 2018-03-11 19:11:46 ] INFO Reading bam file 006.bam for sample with name sample006. This might take some time... [ 2018-03-11 19:12:23 ] INFO Counting reads overlapping with given annotation... [ 2018-03-11 19:12:23 ] INFO ...for single-end reads... [ 2018-03-11 19:12:23 ] INFO ...assuming forward sequenced reads... [ 2018-03-11 19:12:27 ] INFO Counting reads overlapping with given annotation... [ 2018-03-11 19:12:27 ] INFO ...for single-end reads... [ 2018-03-11 19:12:27 ] INFO ...assuming forward sequenced reads... [ 2018-03-11 19:15:59 ] INFO Exporting raw read counts table to metaseqR-out/lists/raw_counts_table.txt.gz [ 2018-03-11 19:16:03 ] INFO Checking chromosomes in exon counts and gene annotation... [ 2018-03-11 19:16:03 ] INFO Processing exons... [ 2018-03-11 19:16:03 ] INFO Separating exons per gene for sample005... [ 2018-03-11 19:36:21 ] INFO Separating exons per gene for sample006... [ 2018-03-11 20:13:04 ] INFO Saving gene model to metaseqR-out/data/gene_model.RData [ 2018-03-11 20:14:40 ] INFO Applying exon filter min.active.exons... [ 2018-03-11 20:14:40 ] INFO Checking read presence in exons for sample005... [ 2018-03-11 20:16:02 ] INFO Checking read presence in exons for sample006... [ 2018-03-11 20:17:05 ] INFO Summarizing count data... [ 2018-03-11 20:23:37 ] INFO Removing genes with zero counts in all samples... [ 2018-03-11 20:24:30 ] INFO Normalizing with: edger [ 2018-03-11 20:25:04 ] INFO Applying gene filter length... [ 2018-03-11 20:25:05 ] INFO Threshold below which ignored: 500 [ 2018-03-11 20:25:05 ] INFO Applying gene filter avg.reads... [ 2018-03-11 20:25:38 ] INFO Threshold below which ignored: 0.720374605173482 [ 2018-03-11 20:25:38 ] INFO Applying gene filter expression... [ 2018-03-11 20:26:04 ] INFO Threshold below which ignored: 275.5 [ 2018-03-11 20:26:05 ] INFO Applying gene filter out.list... [ 2018-03-11 20:26:19 ] INFO 12996 genes filtered out [ 2018-03-11 20:26:19 ] INFO 9628 genes remain after filtering [ 2018-03-11 20:26:19 ] INFO Running statistical tests with: deseq [ 2018-03-11 20:26:25 ] WARN No replication detected! There is a possibility that DESeq will fail to estimate dispersions... [ 2018-03-11 20:29:11 ] INFO Contrast: sample005_vs_sample006 [ 2018-03-11 20:38:30 ] INFO Contrast sample005_vs_sample006: found 393 genes [ 2018-03-11 20:38:30 ] INFO Running statistical tests with: edger [ 2018-03-11 20:38:30 ] WARN No replication when testing with edgeR! Consider using another statistical test or just performing empirical analysis. Setting to 0.2... [ 2018-03-11 20:38:30 ] INFO Contrast: sample005_vs_sample006 [ 2018-03-11 20:38:54 ] INFO Contrast sample005_vs_sample006: found 2663 genes [ 2018-03-11 20:38:54 ] INFO Running statistical tests with: noiseq [ 2018-03-11 20:39:02 ] INFO Contrast: sample005_vs_sample006 [ 2018-03-11 22:30:50 ] INFO Contrast sample005_vs_sample006: found 4479 genes [ 2018-03-11 22:30:50 ] INFO Exporting and compressing normalized read counts table to metaseqR-out/lists/normalized_counts_table.txt [ 2018-03-11 22:30:51 ] INFO Performing meta-analysis with pandora [ 2018-03-11 22:30:51 ] INFO Building output files... [ 2018-03-11 22:30:52 ] INFO Contrast: sample005_vs_sample006 [ 2018-03-11 22:30:52 ] INFO Adding non-filtered data... [ 2018-03-11 22:30:52 ] INFO binding annotation... [ 2018-03-11 22:30:54 ] INFO binding p-values... [ 2018-03-11 22:30:54 ] INFO binding meta p-values... [ 2018-03-11 22:30:55 ] INFO binding adjusted meta p-values... [ 2018-03-11 22:30:55 ] INFO binding natural normalized fold changes... [ 2018-03-11 22:30:55 ] INFO binding log2 normalized fold changes... [ 2018-03-11 22:31:00 ] INFO binding natural raw fold changes... [ 2018-03-11 22:31:00 ] INFO binding log2 raw fold changes... [ 2018-03-11 22:31:00 ] INFO binding normalized mean counts... [ 2018-03-11 22:31:00 ] INFO binding normalized count sds... [ 2018-03-11 22:31:02 ] INFO binding normalized count CVs... [ 2018-03-11 22:31:03 ] INFO binding normalized counts RCVs... [ 2018-03-11 22:31:07 ] INFO binding raw mean counts... [ 2018-03-11 22:31:07 ] INFO binding raw counts sds... [ 2018-03-11 22:31:08 ] INFO binding raw counts CVs... [ 2018-03-11 22:31:10 ] INFO binding raw counts RCVs... [ 2018-03-11 22:31:13 ] INFO binding normalized mean counts... [ 2018-03-11 22:31:14 ] INFO binding normalized count sds... [ 2018-03-11 22:31:15 ] INFO binding normalized count CVs... [ 2018-03-11 22:31:16 ] INFO binding normalized counts RCVs... [ 2018-03-11 22:31:20 ] INFO binding raw mean counts... [ 2018-03-11 22:31:20 ] INFO binding raw counts sds... [ 2018-03-11 22:31:21 ] INFO binding raw counts CVs... [ 2018-03-11 22:31:22 ] INFO binding raw counts RCVs... [ 2018-03-11 22:31:26 ] INFO binding all normalized counts for sample005... [ 2018-03-11 22:31:26 ] INFO binding all raw counts for sample005... [ 2018-03-11 22:31:26 ] INFO binding all normalized counts for sample006... [ 2018-03-11 22:31:26 ] INFO binding all raw counts for sample006... [ 2018-03-11 22:31:27 ] INFO Writing output... [ 2018-03-11 22:31:27 ] INFO Adding filtered data... [ 2018-03-11 22:31:27 ] INFO binding annotation... [ 2018-03-11 22:31:27 ] INFO binding p-values... [ 2018-03-11 22:31:27 ] INFO binding meta p-values... [ 2018-03-11 22:31:27 ] INFO binding adjusted meta p-values... [ 2018-03-11 22:31:28 ] INFO binding natural normalized fold changes... [ 2018-03-11 22:31:28 ] INFO binding log2 normalized fold changes... [ 2018-03-11 22:31:39 ] INFO binding natural raw fold changes... [ 2018-03-11 22:31:39 ] INFO binding log2 raw fold changes... [ 2018-03-11 22:31:39 ] INFO binding normalized mean counts... [ 2018-03-11 22:31:39 ] INFO binding normalized count sds... [ 2018-03-11 22:31:40 ] INFO binding normalized count CVs... [ 2018-03-11 22:31:42 ] INFO binding normalized counts RCVs... [ 2018-03-11 22:31:46 ] INFO binding raw mean counts... [ 2018-03-11 22:31:46 ] INFO binding raw counts sds... [ 2018-03-11 22:31:48 ] INFO binding raw counts CVs... [ 2018-03-11 22:31:49 ] INFO binding raw counts RCVs... [ 2018-03-11 22:31:54 ] INFO binding normalized mean counts... [ 2018-03-11 22:31:54 ] INFO binding normalized count sds... [ 2018-03-11 22:31:55 ] INFO binding normalized count CVs... [ 2018-03-11 22:31:57 ] INFO binding normalized counts RCVs... [ 2018-03-11 22:32:01 ] INFO binding raw mean counts... [ 2018-03-11 22:32:02 ] INFO binding raw counts sds... [ 2018-03-11 22:32:03 ] INFO binding raw counts CVs... [ 2018-03-11 22:32:04 ] INFO binding raw counts RCVs... [ 2018-03-11 22:32:09 ] INFO binding all normalized counts for sample005... [ 2018-03-11 22:32:09 ] INFO binding all raw counts for sample005... [ 2018-03-11 22:32:09 ] INFO binding all normalized counts for sample006... [ 2018-03-11 22:32:09 ] INFO binding all raw counts for sample006... [ 2018-03-11 22:32:09 ] INFO Writing output... [ 2018-03-11 22:32:11 ] INFO Creating quality control graphs... [ 2018-03-11 22:32:11 ] INFO Plotting in png format... [ 2018-03-11 22:32:11 ] INFO Plotting mds... [ 2018-03-11 22:32:11 ] WARN MDS plot cannot be created with less than 3 samples! Skipping... [ 2018-03-11 22:32:11 ] INFO Plotting biodetection... [ 2018-03-11 22:32:18 ] INFO Plotting countsbio... [ 2018-03-11 22:32:20 ] INFO Plotting saturation... [ 2018-03-11 22:32:23 ] INFO Plotting readnoise... [ 2018-03-11 22:32:23 ] INFO Plotting rnacomp... [ 2018-03-11 22:32:24 ] WARN RNA composition plot cannot be created with less than 3 samples! Skipping... [ 2018-03-11 22:32:24 ] INFO Plotting boxplot... [ 2018-03-11 22:32:24 ] INFO Plotting gcbias... [ 2018-03-11 22:32:24 ] INFO Plotting lengthbias... [ 2018-03-11 22:32:25 ] INFO Plotting meandiff... [ 2018-03-11 22:32:25 ] WARN Cannot create a mean-difference plot with one sample per condition! Skipping... [ 2018-03-11 22:32:25 ] WARN Cannot create a mean-difference plot with one sample per condition! Skipping... [ 2018-03-11 22:32:25 ] INFO Plotting meanvar... [ 2018-03-11 22:32:25 ] WARN Cannot create a mean-variance plot with one sample per condition! Skipping... [ 2018-03-11 22:32:25 ] WARN Cannot create a mean-variance plot with one sample per condition! Skipping... [ 2018-03-11 22:32:25 ] INFO Plotting rnacomp... [ 2018-03-11 22:32:25 ] WARN RNA composition plot cannot be created with less than 3 samples! Skipping... [ 2018-03-11 22:32:25 ] INFO Plotting boxplot... [ 2018-03-11 22:32:25 ] INFO Plotting gcbias... [ 2018-03-11 22:32:25 ] INFO Plotting lengthbias... [ 2018-03-11 22:32:25 ] INFO Plotting meandiff... [ 2018-03-11 22:32:26 ] WARN Cannot create a mean-difference plot with one sample per condition! Skipping... [ 2018-03-11 22:32:26 ] WARN Cannot create a mean-difference plot with one sample per condition! Skipping... [ 2018-03-11 22:32:26 ] INFO Plotting meanvar... [ 2018-03-11 22:32:26 ] WARN Cannot create a mean-variance plot with one sample per condition! Skipping... [ 2018-03-11 22:32:26 ] WARN Cannot create a mean-variance plot with one sample per condition! Skipping... [ 2018-03-11 22:32:26 ] INFO Plotting deheatmap... [ 2018-03-11 22:32:26 ] INFO Contrast: sample005_vs_sample006 [ 2018-03-11 22:36:48 ] INFO Plotting volcano... [ 2018-03-11 22:36:48 ] INFO Contrast: sample005_vs_sample006 [ 2018-03-11 22:36:49 ] INFO Plotting biodist... [ 2018-03-11 22:36:49 ] INFO Contrast: sample005_vs_sample006 [ 2018-03-11 22:36:49 ] INFO Plotting filtered... [ 2018-03-11 22:36:50 ] INFO Plotting in pdf format... [ 2018-03-11 22:36:50 ] INFO Plotting mds... [ 2018-03-11 22:36:50 ] WARN MDS plot cannot be created with less than 3 samples! Skipping... [ 2018-03-11 22:36:50 ] INFO Plotting biodetection... [ 2018-03-11 22:36:51 ] INFO Plotting countsbio... [ 2018-03-11 22:36:52 ] INFO Plotting saturation... [ 2018-03-11 22:36:54 ] INFO Plotting readnoise... [ 2018-03-11 22:36:54 ] INFO Plotting rnacomp... [ 2018-03-11 22:36:54 ] WARN RNA composition plot cannot be created with less than 3 samples! Skipping... [ 2018-03-11 22:36:54 ] INFO Plotting boxplot... [ 2018-03-11 22:36:54 ] INFO Plotting gcbias... [ 2018-03-11 22:36:54 ] INFO Plotting lengthbias... [ 2018-03-11 22:36:55 ] INFO Plotting meandiff... [ 2018-03-11 22:36:55 ] WARN Cannot create a mean-difference plot with one sample per condition! Skipping... [ 2018-03-11 22:36:55 ] WARN Cannot create a mean-difference plot with one sample per condition! Skipping... [ 2018-03-11 22:36:55 ] INFO Plotting meanvar... [ 2018-03-11 22:36:55 ] WARN Cannot create a mean-variance plot with one sample per condition! Skipping... [ 2018-03-11 22:36:55 ] WARN Cannot create a mean-variance plot with one sample per condition! Skipping... [ 2018-03-11 22:36:55 ] INFO Plotting rnacomp... [ 2018-03-11 22:36:55 ] WARN RNA composition plot cannot be created with less than 3 samples! Skipping... [ 2018-03-11 22:36:55 ] INFO Plotting boxplot... [ 2018-03-11 22:36:55 ] INFO Plotting gcbias... [ 2018-03-11 22:36:55 ] INFO Plotting lengthbias... [ 2018-03-11 22:36:55 ] INFO Plotting meandiff... [ 2018-03-11 22:36:55 ] WARN Cannot create a mean-difference plot with one sample per condition! Skipping... [ 2018-03-11 22:36:55 ] WARN Cannot create a mean-difference plot with one sample per condition! Skipping... [ 2018-03-11 22:36:55 ] INFO Plotting meanvar... [ 2018-03-11 22:36:55 ] WARN Cannot create a mean-variance plot with one sample per condition! Skipping... [ 2018-03-11 22:36:55 ] WARN Cannot create a mean-variance plot with one sample per condition! Skipping... [ 2018-03-11 22:36:55 ] INFO Plotting deheatmap... [ 2018-03-11 22:36:55 ] INFO Contrast: sample005_vs_sample006 [ 2018-03-11 22:39:09 ] INFO Plotting volcano... [ 2018-03-11 22:39:09 ] INFO Contrast: sample005_vs_sample006 [ 2018-03-11 22:39:10 ] INFO Plotting biodist... [ 2018-03-11 22:39:10 ] INFO Contrast: sample005_vs_sample006 [ 2018-03-11 22:39:10 ] INFO Plotting filtered... [ 2018-03-11 22:39:11 ] INFO Creating HTML report... [ 2018-03-11 22:39:11 ] INFO Compressing figures...
Biotype detection
Biotype detection counts
Read and biotype saturation
RNA-Seq reads noise
Boxplots
GC content bias
Gene/transcript length bias
Chromosome and biotype distribution of filtered genes
Volcano plots
DEG heatmaps
Chromosome and biotype distributions of DEGs
Results
DEG table for the contrast sample005_vs_sample006The following table presents the top 10% statistically significant genes (use the download links below the table to retrieve the whole list) for the contrast sample005_vs_sample006. The fields of the table correspond to the requested features to be exported. The table can be searched using the search field on the top right. | chromosome | start | end | gene_id | gc_content | strand | gene_name | biotype | p-value_deseq | p-value_edger | p-value_noiseq | meta_p-value_sample005_vs_sample006 | meta_FDR_sample005_vs_sample006 | natural_normalized_fold_change_sample005_vs_sample006 | log2_normalized_fold_change_sample005_vs_sample006 | natural_raw_fold_change_sample005_vs_sample006 | log2_raw_fold_change_sample005_vs_sample006 | natural_normalized_mean_counts_sample005 | log2_normalized_mean_counts_sample005 | natural_normalized_sd_counts_sample005 | log2_normalized_sd_counts_sample005 | natural_normalized_cv_counts_sample005 | log2_normalized_cv_counts_sample005 | natural_normalized_rcv_counts_sample005 | log2_normalized_rcv_counts_sample005 | natural_raw_mean_counts_sample005 | log2_raw_mean_counts_sample005 | natural_raw_sd_counts_sample005 | log2_raw_sd_counts_sample005 | natural_raw_cv_counts_sample005 | log2_raw_cv_counts_sample005 | natural_raw_rcv_counts_sample005 | log2_raw_rcv_counts_sample005 | natural_normalized_mean_counts_sample006 | log2_normalized_mean_counts_sample006 | natural_normalized_sd_counts_sample006 | log2_normalized_sd_counts_sample006 | natural_normalized_cv_counts_sample006 | log2_normalized_cv_counts_sample006 | natural_normalized_rcv_counts_sample006 | log2_normalized_rcv_counts_sample006 | natural_raw_mean_counts_sample006 | log2_raw_mean_counts_sample006 | natural_raw_sd_counts_sample006 | log2_raw_sd_counts_sample006 | natural_raw_cv_counts_sample006 | log2_raw_cv_counts_sample006 | natural_raw_rcv_counts_sample006 | log2_raw_rcv_counts_sample006 | natural_normalized_counts_sample005 | log2_normalized_counts_sample005 | natural_raw_counts_sample005 | log2_raw_counts_sample005 | natural_normalized_counts_sample006 | log2_normalized_counts_sample006 | natural_raw_counts_sample006 | log2_raw_counts_sample006 |
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| chr8 | 144873089 | 144897549 | uc003yzo.1 | 0.6250 | - | SCRIB | protein_coding | 6.56e-10 | 6.02e-23 | 0.00e+00 | 6.19e-19 | 5.96e-15 | 26.4414 | 4.724726 | 20.4034 | 4.350738 | 3.86e+03 | 1.19e+01 | NA | NA | NA | NA | 0 | 0 | 4.35e+03 | 1.21e+01 | NA | NA | NA | NA | 0 | 0 | 1.02e+05 | 1.66e+01 | NA | NA | NA | NA | 0 | 0 | 8.88e+04 | 1.64e+01 | NA | NA | NA | NA | 0 | 0 | 3.86e+03 | 1.19e+01 | 4.35e+03 | 1.21e+01 | 1.02e+05 | 1.66e+01 | 8.88e+04 | 1.64e+01 | | chr1 | 178511930 | 178518024 | uc001glx.1 | 0.4904 | + | C1orf220 | processed_transcript | 9.24e-10 | 4.79e-34 | 1.46e-03 | 8.65e-16 | 4.16e-12 | 168.0000 | 7.392317 | 131.7000 | 7.041112 | 9.00e+00 | 3.32e+00 | NA | NA | NA | NA | 0 | 0 | 1.00e+01 | 3.46e+00 | NA | NA | NA | NA | 0 | 0 | 1.51e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 1.32e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 9.00e+00 | 3.32e+00 | 1.00e+01 | 3.46e+00 | 1.51e+03 | 1.06e+01 | 1.32e+03 | 1.04e+01 | | chr9 | 35673914 | 35681154 | uc003zxo.4 | 0.5252 | + | CA9 | protein_coding | 1.15e-08 | 1.14e-28 | 9.56e-04 | 1.08e-13 | 3.46e-10 | 0.0143 | -6.125314 | 0.0112 | -6.477142 | 1.82e+03 | 1.08e+01 | NA | NA | NA | NA | 0 | 0 | 2.05e+03 | 1.10e+01 | NA | NA | NA | NA | 0 | 0 | 2.60e+01 | 4.75e+00 | NA | NA | NA | NA | 0 | 0 | 2.30e+01 | 4.58e+00 | NA | NA | NA | NA | 0 | 0 | 1.82e+03 | 1.08e+01 | 2.05e+03 | 1.10e+01 | 2.60e+01 | 4.75e+00 | 2.30e+01 | 4.58e+00 | | chr18 | 61554938 | 61571124 | uc002ljo.3 | 0.3843 | + | SERPINB2 | protein_coding | 5.83e-07 | 9.41e-29 | 4.10e-03 | 6.08e-13 | 1.46e-09 | 100.8889 | 6.656623 | 79.1000 | 6.305606 | 9.00e+00 | 3.32e+00 | NA | NA | NA | NA | 0 | 0 | 1.00e+01 | 3.46e+00 | NA | NA | NA | NA | 0 | 0 | 9.08e+02 | 9.83e+00 | NA | NA | NA | NA | 0 | 0 | 7.91e+02 | 9.63e+00 | NA | NA | NA | NA | 0 | 0 | 9.00e+00 | 3.32e+00 | 1.00e+01 | 3.46e+00 | 9.08e+02 | 9.83e+00 | 7.91e+02 | 9.63e+00 | | chr20 | 61273796 | 61303647 | uc002ydb.1 | 0.6023 | + | SLCO4A1 | protein_coding | 7.64e-09 | 8.72e-24 | 1.04e-04 | 1.91e-12 | 3.67e-09 | 0.0324 | -4.948955 | 0.0249 | -5.325114 | 5.22e+03 | 1.24e+01 | NA | NA | NA | NA | 0 | 0 | 5.89e+03 | 1.25e+01 | NA | NA | NA | NA | 0 | 0 | 1.69e+02 | 7.41e+00 | NA | NA | NA | NA | 0 | 0 | 1.47e+02 | 7.21e+00 | NA | NA | NA | NA | 0 | 0 | 5.22e+03 | 1.24e+01 | 5.89e+03 | 1.25e+01 | 1.69e+02 | 7.41e+00 | 1.47e+02 | 7.21e+00 | | chr7 | 103112230 | 103629963 | uc010liz.3 | 0.3748 | - | RELN | protein_coding | 1.69e-07 | 3.09e-23 | 5.97e-04 | 1.46e-11 | 2.35e-08 | 31.4416 | 4.974601 | 24.2414 | 4.599400 | 7.70e+01 | 6.29e+00 | NA | NA | NA | NA | 0 | 0 | 8.70e+01 | 6.46e+00 | NA | NA | NA | NA | 0 | 0 | 2.42e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 2.11e+03 | 1.10e+01 | NA | NA | NA | NA | 0 | 0 | 7.70e+01 | 6.29e+00 | 8.70e+01 | 6.46e+00 | 2.42e+03 | 1.12e+01 | 2.11e+03 | 1.10e+01 | | chr20 | 23666276 | 23669662 | uc002wto.1 | 0.5633 | - | CST4 | protein_coding | 6.18e-07 | 1.23e-18 | 1.66e-04 | 5.01e-10 | 6.33e-07 | 0.0555 | -4.171879 | 0.0427 | -4.547976 | 4.43e+03 | 1.21e+01 | NA | NA | NA | NA | 0 | 0 | 5.01e+03 | 1.23e+01 | NA | NA | NA | NA | 0 | 0 | 2.46e+02 | 7.95e+00 | NA | NA | NA | NA | 0 | 0 | 2.14e+02 | 7.75e+00 | NA | NA | NA | NA | 0 | 0 | 4.43e+03 | 1.21e+01 | 5.01e+03 | 1.23e+01 | 2.46e+02 | 7.95e+00 | 2.14e+02 | 7.75e+00 | | chr2 | 241938254 | 242033643 | uc002wah.1 | 0.5083 | + | SNED1 | protein_coding | 6.06e-06 | 1.38e-20 | 1.74e-03 | 5.26e-10 | 6.33e-07 | 0.0387 | -4.689692 | 0.0301 | -5.053980 | 1.47e+03 | 1.05e+01 | NA | NA | NA | NA | 0 | 0 | 1.66e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 5.70e+01 | 5.86e+00 | NA | NA | NA | NA | 0 | 0 | 5.00e+01 | 5.67e+00 | NA | NA | NA | NA | 0 | 0 | 1.47e+03 | 1.05e+01 | 1.66e+03 | 1.07e+01 | 5.70e+01 | 5.86e+00 | 5.00e+01 | 5.67e+00 | | chr3 | 48601505 | 48632593 | uc003ctz.2 | 0.6010 | - | COL7A1 | protein_coding | 1.04e-06 | 1.59e-18 | 2.34e-04 | 7.28e-10 | 7.79e-07 | 0.0557 | -4.166085 | 0.0430 | -4.540692 | 3.75e+03 | 1.19e+01 | NA | NA | NA | NA | 0 | 0 | 4.24e+03 | 1.20e+01 | NA | NA | NA | NA | 0 | 0 | 2.09e+02 | 7.71e+00 | NA | NA | NA | NA | 0 | 0 | 1.82e+02 | 7.52e+00 | NA | NA | NA | NA | 0 | 0 | 3.75e+03 | 1.19e+01 | 4.24e+03 | 1.20e+01 | 2.09e+02 | 7.71e+00 | 1.82e+02 | 7.52e+00 | | chr20 | 30776948 | 30778163 | uc002wxm.1 | 0.6595 | - | TSPY26P | processed_transcript | 1.19e-03 | 1.94e-22 | 2.38e-02 | 1.77e-09 | 1.70e-06 | 139.5000 | 7.124121 | 121.5000 | 6.924813 | 2.00e+00 | 1.58e+00 | NA | NA | NA | NA | 0 | 0 | 2.00e+00 | 1.58e+00 | NA | NA | NA | NA | 0 | 0 | 2.79e+02 | 8.13e+00 | NA | NA | NA | NA | 0 | 0 | 2.43e+02 | 7.93e+00 | NA | NA | NA | NA | 0 | 0 | 2.00e+00 | 1.58e+00 | 2.00e+00 | 1.58e+00 | 2.79e+02 | 8.13e+00 | 2.43e+02 | 7.93e+00 | | chr7 | 139528951 | 139720125 | uc011kqv.2 | 0.4478 | + | TBXAS1 | protein_coding | 2.38e-04 | 1.61e-20 | 8.76e-03 | 3.23e-09 | 2.83e-06 | 0.0263 | -5.250456 | 0.0202 | -5.632716 | 5.71e+02 | 9.16e+00 | NA | NA | NA | NA | 0 | 0 | 6.45e+02 | 9.34e+00 | NA | NA | NA | NA | 0 | 0 | 1.50e+01 | 4.00e+00 | NA | NA | NA | NA | 0 | 0 | 1.30e+01 | 3.81e+00 | NA | NA | NA | NA | 0 | 0 | 5.71e+02 | 9.16e+00 | 6.45e+02 | 9.34e+00 | 1.50e+01 | 4.00e+00 | 1.30e+01 | 3.81e+00 | | chr1 | 145524989 | 145543868 | uc001eoa.3 | 0.4837 | + | ITGA10 | protein_coding | 8.00e-06 | 1.47e-16 | 4.31e-04 | 7.97e-09 | 6.39e-06 | 0.0683 | -3.871219 | 0.0527 | -4.244904 | 2.96e+03 | 1.15e+01 | NA | NA | NA | NA | 0 | 0 | 3.34e+03 | 1.17e+01 | NA | NA | NA | NA | 0 | 0 | 2.02e+02 | 7.67e+00 | NA | NA | NA | NA | 0 | 0 | 1.76e+02 | 7.47e+00 | NA | NA | NA | NA | 0 | 0 | 2.96e+03 | 1.15e+01 | 3.34e+03 | 1.17e+01 | 2.02e+02 | 7.67e+00 | 1.76e+02 | 7.47e+00 | | chr2 | 187558788 | 187628512 | uc002ups.3 | 0.3733 | + | FAM171B | protein_coding | 3.65e-04 | 1.89e-18 | 6.53e-03 | 1.65e-08 | 1.22e-05 | 22.7742 | 4.509328 | 17.5714 | 4.135160 | 3.10e+01 | 5.00e+00 | NA | NA | NA | NA | 0 | 0 | 3.50e+01 | 5.17e+00 | NA | NA | NA | NA | 0 | 0 | 7.06e+02 | 9.47e+00 | NA | NA | NA | NA | 0 | 0 | 6.15e+02 | 9.27e+00 | NA | NA | NA | NA | 0 | 0 | 3.10e+01 | 5.00e+00 | 3.50e+01 | 5.17e+00 | 7.06e+02 | 9.47e+00 | 6.15e+02 | 9.27e+00 | | chr20 | 23728189 | 23731574 | uc002wtp.3 | 0.5647 | - | CST1 | protein_coding | 8.16e-06 | 8.69e-15 | 1.30e-04 | 2.10e-08 | 1.38e-05 | 0.0855 | -3.548572 | 0.0659 | -3.923793 | 5.32e+03 | 1.24e+01 | NA | NA | NA | NA | 0 | 0 | 6.01e+03 | 1.26e+01 | NA | NA | NA | NA | 0 | 0 | 4.55e+02 | 8.83e+00 | NA | NA | NA | NA | 0 | 0 | 3.96e+02 | 8.63e+00 | NA | NA | NA | NA | 0 | 0 | 5.32e+03 | 1.24e+01 | 6.01e+03 | 1.26e+01 | 4.55e+02 | 8.83e+00 | 3.96e+02 | 8.63e+00 | | chr8 | 143692404 | 143695833 | uc003ywn.2 | 0.6676 | - | ARC | protein_coding | 2.93e-03 | 1.39e-19 | 2.44e-02 | 2.15e-08 | 1.38e-05 | 69.0000 | 6.108524 | 48.0000 | 5.584963 | 4.00e+00 | 2.32e+00 | NA | NA | NA | NA | 0 | 0 | 5.00e+00 | 2.58e+00 | NA | NA | NA | NA | 0 | 0 | 2.76e+02 | 8.11e+00 | NA | NA | NA | NA | 0 | 0 | 2.40e+02 | 7.91e+00 | NA | NA | NA | NA | 0 | 0 | 4.00e+00 | 2.32e+00 | 5.00e+00 | 2.58e+00 | 2.76e+02 | 8.11e+00 | 2.40e+02 | 7.91e+00 | | chr11 | 565656 | 568457 | uc021qbm.1 | 0.6153 | - | MIR210HG | lincRNA | 3.57e-04 | 8.24e-18 | 5.95e-03 | 2.60e-08 | 1.56e-05 | 0.0478 | -4.386581 | 0.0365 | -4.777123 | 7.53e+02 | 9.56e+00 | NA | NA | NA | NA | 0 | 0 | 8.50e+02 | 9.73e+00 | NA | NA | NA | NA | 0 | 0 | 3.60e+01 | 5.21e+00 | NA | NA | NA | NA | 0 | 0 | 3.10e+01 | 5.00e+00 | NA | NA | NA | NA | 0 | 0 | 7.53e+02 | 9.56e+00 | 8.50e+02 | 9.73e+00 | 3.60e+01 | 5.21e+00 | 3.10e+01 | 5.00e+00 | | chr20 | 23804403 | 23807312 | uc002wtq.1 | 0.5653 | - | CST2 | protein_coding | 4.38e-04 | 1.27e-17 | 6.55e-03 | 3.32e-08 | 1.80e-05 | 0.0467 | -4.421172 | 0.0363 | -4.782264 | 7.07e+02 | 9.47e+00 | NA | NA | NA | NA | 0 | 0 | 7.98e+02 | 9.64e+00 | NA | NA | NA | NA | 0 | 0 | 3.30e+01 | 5.09e+00 | NA | NA | NA | NA | 0 | 0 | 2.90e+01 | 4.91e+00 | NA | NA | NA | NA | 0 | 0 | 7.07e+02 | 9.47e+00 | 7.98e+02 | 9.64e+00 | 3.30e+01 | 5.09e+00 | 2.90e+01 | 4.91e+00 | | chr10 | 69865873 | 69971773 | uc001jnm.5 | 0.4059 | + | MYPN | protein_coding | 2.60e-03 | 8.91e-19 | 1.65e-02 | 3.37e-08 | 1.80e-05 | 33.4545 | 5.064130 | 26.7500 | 4.741467 | 1.10e+01 | 3.58e+00 | NA | NA | NA | NA | 0 | 0 | 1.20e+01 | 3.70e+00 | NA | NA | NA | NA | 0 | 0 | 3.68e+02 | 8.53e+00 | NA | NA | NA | NA | 0 | 0 | 3.21e+02 | 8.33e+00 | NA | NA | NA | NA | 0 | 0 | 1.10e+01 | 3.58e+00 | 1.20e+01 | 3.70e+00 | 3.68e+02 | 8.53e+00 | 3.21e+02 | 8.33e+00 | | chr1 | 26503980 | 26516375 | uc001blm.4 | 0.5515 | + | CNKSR1 | protein_coding | 2.31e-03 | 2.44e-18 | 1.44e-02 | 4.33e-08 | 2.11e-05 | 28.9286 | 4.854423 | 22.0625 | 4.463524 | 1.40e+01 | 3.91e+00 | NA | NA | NA | NA | 0 | 0 | 1.60e+01 | 4.09e+00 | NA | NA | NA | NA | 0 | 0 | 4.05e+02 | 8.67e+00 | NA | NA | NA | NA | 0 | 0 | 3.53e+02 | 8.47e+00 | NA | NA | NA | NA | 0 | 0 | 1.40e+01 | 3.91e+00 | 1.60e+01 | 4.09e+00 | 4.05e+02 | 8.67e+00 | 3.53e+02 | 8.47e+00 | | chr7 | 128470482 | 128499328 | uc003vnz.4 | 0.6084 | + | FLNC | protein_coding | 1.38e-05 | 5.87e-13 | 1.04e-05 | 4.38e-08 | 2.11e-05 | 9.3328 | 3.222315 | 7.2034 | 2.848687 | 1.34e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.51e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 1.25e+04 | 1.36e+01 | NA | NA | NA | NA | 0 | 0 | 1.09e+04 | 1.34e+01 | NA | NA | NA | NA | 0 | 0 | 1.34e+03 | 1.04e+01 | 1.51e+03 | 1.06e+01 | 1.25e+04 | 1.36e+01 | 1.09e+04 | 1.34e+01 | | chr20 | 56223447 | 56285031 | uc002xyq.4 | 0.5449 | - | PMEPA1 | protein_coding | 1.80e-05 | 4.34e-14 | 1.71e-04 | 5.12e-08 | 2.35e-05 | 0.0919 | -3.443417 | 0.0710 | -3.816896 | 4.57e+03 | 1.22e+01 | NA | NA | NA | NA | 0 | 0 | 5.16e+03 | 1.23e+01 | NA | NA | NA | NA | 0 | 0 | 4.20e+02 | 8.72e+00 | NA | NA | NA | NA | 0 | 0 | 3.66e+02 | 8.52e+00 | NA | NA | NA | NA | 0 | 0 | 4.57e+03 | 1.22e+01 | 5.16e+03 | 1.23e+01 | 4.20e+02 | 8.72e+00 | 3.66e+02 | 8.52e+00 | | chr10 | 133781203 | 133795435 | uc001lkv.1 | 0.4955 | - | BNIP3 | protein_coding | 1.42e-05 | 1.30e-12 | 1.04e-05 | 5.76e-08 | 2.52e-05 | 0.1115 | -3.165159 | 0.0860 | -3.539245 | 1.84e+04 | 1.42e+01 | NA | NA | NA | NA | 0 | 0 | 2.08e+04 | 1.43e+01 | NA | NA | NA | NA | 0 | 0 | 2.06e+03 | 1.10e+01 | NA | NA | NA | NA | 0 | 0 | 1.79e+03 | 1.08e+01 | NA | NA | NA | NA | 0 | 0 | 1.84e+04 | 1.42e+01 | 2.08e+04 | 1.43e+01 | 2.06e+03 | 1.10e+01 | 1.79e+03 | 1.08e+01 | | chr13 | 42031541 | 42045013 | uc001uyi.2 | 0.4604 | + | RGCC | protein_coding | 1.67e-04 | 1.43e-15 | 2.36e-03 | 8.26e-08 | 3.46e-05 | 0.0712 | -3.812885 | 0.0549 | -4.187627 | 1.31e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.48e+03 | 1.05e+01 | NA | NA | NA | NA | 0 | 0 | 9.30e+01 | 6.55e+00 | NA | NA | NA | NA | 0 | 0 | 8.10e+01 | 6.36e+00 | NA | NA | NA | NA | 0 | 0 | 1.31e+03 | 1.04e+01 | 1.48e+03 | 1.05e+01 | 9.30e+01 | 6.55e+00 | 8.10e+01 | 6.36e+00 | | chr20 | 34203808 | 34208965 | uc002xdb.1 | 0.5946 | + | SPAG4 | protein_coding | 7.92e-05 | 2.06e-14 | 8.57e-04 | 1.12e-07 | 4.49e-05 | 0.0858 | -3.543645 | 0.0660 | -3.921336 | 2.13e+03 | 1.11e+01 | NA | NA | NA | NA | 0 | 0 | 2.41e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 1.83e+02 | 7.52e+00 | NA | NA | NA | NA | 0 | 0 | 1.59e+02 | 7.32e+00 | NA | NA | NA | NA | 0 | 0 | 2.13e+03 | 1.11e+01 | 2.41e+03 | 1.12e+01 | 1.83e+02 | 7.52e+00 | 1.59e+02 | 7.32e+00 | | chr9 | 137533650 | 137736688 | uc031tfl.1 | 0.5600 | + | COL5A1 | protein_coding | 3.14e-05 | 2.93e-12 | 2.60e-05 | 1.34e-07 | 5.15e-05 | 0.1157 | -3.111355 | 0.0893 | -3.485671 | 9.44e+03 | 1.32e+01 | NA | NA | NA | NA | 0 | 0 | 1.07e+04 | 1.34e+01 | NA | NA | NA | NA | 0 | 0 | 1.09e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 9.51e+02 | 9.89e+00 | NA | NA | NA | NA | 0 | 0 | 9.44e+03 | 1.32e+01 | 1.07e+04 | 1.34e+01 | 1.09e+03 | 1.01e+01 | 9.51e+02 | 9.89e+00 | | chr16 | 56716381 | 56718108 | uc002ejy.3 | 0.5376 | + | MT1X | protein_coding | 3.61e-05 | 3.86e-12 | 3.12e-05 | 1.63e-07 | 6.04e-05 | 0.1172 | -3.092512 | 0.0905 | -3.466109 | 9.02e+03 | 1.31e+01 | NA | NA | NA | NA | 0 | 0 | 1.02e+04 | 1.33e+01 | NA | NA | NA | NA | 0 | 0 | 1.06e+03 | 1.00e+01 | NA | NA | NA | NA | 0 | 0 | 9.21e+02 | 9.85e+00 | NA | NA | NA | NA | 0 | 0 | 9.02e+03 | 1.31e+01 | 1.02e+04 | 1.33e+01 | 1.06e+03 | 1.00e+01 | 9.21e+02 | 9.85e+00 | | chr17 | 38599675 | 38613982 | uc002hus.3 | 0.5305 | + | IGFBP4 | protein_coding | 2.19e-05 | 1.22e-11 | 2.08e-05 | 1.77e-07 | 6.30e-05 | 0.1251 | -2.998467 | 0.0966 | -3.372477 | 1.03e+05 | 1.67e+01 | NA | NA | NA | NA | 0 | 0 | 1.17e+05 | 1.68e+01 | NA | NA | NA | NA | 0 | 0 | 1.29e+04 | 1.37e+01 | NA | NA | NA | NA | 0 | 0 | 1.13e+04 | 1.35e+01 | NA | NA | NA | NA | 0 | 0 | 1.03e+05 | 1.67e+01 | 1.17e+05 | 1.68e+01 | 1.29e+04 | 1.37e+01 | 1.13e+04 | 1.35e+01 | | chr1 | 154377668 | 154441926 | uc001fez.2 | 0.4912 | + | IL6R | protein_coding | 9.97e-03 | 1.03e-16 | 2.47e-02 | 2.93e-07 | 1.01e-04 | 28.0000 | 4.807355 | 22.1818 | 4.471306 | 1.00e+01 | 3.46e+00 | NA | NA | NA | NA | 0 | 0 | 1.10e+01 | 3.58e+00 | NA | NA | NA | NA | 0 | 0 | 2.80e+02 | 8.13e+00 | NA | NA | NA | NA | 0 | 0 | 2.44e+02 | 7.94e+00 | NA | NA | NA | NA | 0 | 0 | 1.00e+01 | 3.46e+00 | 1.10e+01 | 3.58e+00 | 2.80e+02 | 8.13e+00 | 2.44e+02 | 7.94e+00 | | chr11 | 2629557 | 2721228 | uc001lwp.3 | 0.4372 | - | KCNQ1OT1 | antisense | 3.28e-04 | 1.23e-13 | 1.87e-03 | 4.23e-07 | 1.41e-04 | 10.8143 | 3.434866 | 8.3481 | 3.061448 | 1.40e+02 | 7.14e+00 | NA | NA | NA | NA | 0 | 0 | 1.58e+02 | 7.31e+00 | NA | NA | NA | NA | 0 | 0 | 1.51e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 1.32e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.40e+02 | 7.14e+00 | 1.58e+02 | 7.31e+00 | 1.51e+03 | 1.06e+01 | 1.32e+03 | 1.04e+01 | | chr17 | 7999217 | 8022234 | uc010vuo.2 | 0.5176 | - | ALOXE3 | protein_coding | 7.14e-03 | 7.57e-16 | 1.74e-02 | 4.55e-07 | 1.46e-04 | 20.1667 | 4.333901 | 15.8000 | 3.981853 | 1.80e+01 | 4.25e+00 | NA | NA | NA | NA | 0 | 0 | 2.00e+01 | 4.39e+00 | NA | NA | NA | NA | 0 | 0 | 3.63e+02 | 8.51e+00 | NA | NA | NA | NA | 0 | 0 | 3.16e+02 | 8.31e+00 | NA | NA | NA | NA | 0 | 0 | 1.80e+01 | 4.25e+00 | 2.00e+01 | 4.39e+00 | 3.63e+02 | 8.51e+00 | 3.16e+02 | 8.31e+00 | | chr20 | 61294378 | 61297973 | uc002ydd.3 | 0.6096 | - | SLCO4A1-AS1 | antisense | 4.38e-04 | 1.49e-13 | 2.29e-03 | 5.30e-07 | 1.65e-04 | 0.0914 | -3.452009 | 0.0705 | -3.826313 | 1.36e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.53e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 1.24e+02 | 6.97e+00 | NA | NA | NA | NA | 0 | 0 | 1.08e+02 | 6.77e+00 | NA | NA | NA | NA | 0 | 0 | 1.36e+03 | 1.04e+01 | 1.53e+03 | 1.06e+01 | 1.24e+02 | 6.97e+00 | 1.08e+02 | 6.77e+00 | | chr3 | 100211462 | 100296285 | uc003dtz.1 | 0.4001 | + | TMEM45A | protein_coding | 3.90e-04 | 2.72e-13 | 1.88e-03 | 5.84e-07 | 1.73e-04 | 0.0959 | -3.382333 | 0.0738 | -3.759967 | 1.51e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 1.71e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 1.45e+02 | 7.19e+00 | NA | NA | NA | NA | 0 | 0 | 1.26e+02 | 6.99e+00 | NA | NA | NA | NA | 0 | 0 | 1.51e+03 | 1.06e+01 | 1.71e+03 | 1.07e+01 | 1.45e+02 | 7.19e+00 | 1.26e+02 | 6.99e+00 | | chr1 | 153533584 | 153538306 | uc001fcb.3 | 0.5319 | - | S100A2 | protein_coding | 1.73e-04 | 2.00e-12 | 6.02e-04 | 5.93e-07 | 1.73e-04 | 0.1099 | -3.185758 | 0.0847 | -3.562062 | 2.66e+03 | 1.14e+01 | NA | NA | NA | NA | 0 | 0 | 3.00e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 2.92e+02 | 8.19e+00 | NA | NA | NA | NA | 0 | 0 | 2.54e+02 | 7.99e+00 | NA | NA | NA | NA | 0 | 0 | 2.66e+03 | 1.14e+01 | 3.00e+03 | 1.16e+01 | 2.92e+02 | 8.19e+00 | 2.54e+02 | 7.99e+00 | | chr2 | 12856997 | 12882858 | uc002rbv.4 | 0.4771 | + | TRIB2 | protein_coding | 1.50e-04 | 4.62e-12 | 4.10e-04 | 6.57e-07 | 1.86e-04 | 0.1154 | -3.115626 | 0.0890 | -3.489385 | 3.23e+03 | 1.17e+01 | NA | NA | NA | NA | 0 | 0 | 3.65e+03 | 1.18e+01 | NA | NA | NA | NA | 0 | 0 | 3.73e+02 | 8.55e+00 | NA | NA | NA | NA | 0 | 0 | 3.25e+02 | 8.35e+00 | NA | NA | NA | NA | 0 | 0 | 3.23e+03 | 1.17e+01 | 3.65e+03 | 1.18e+01 | 3.73e+02 | 8.55e+00 | 3.25e+02 | 8.35e+00 | | chr11 | 102813720 | 102826463 | uc001phl.3 | 0.3643 | - | MMP13 | protein_coding | 8.21e-03 | 3.35e-15 | 1.68e-02 | 7.73e-07 | 2.13e-04 | 17.8095 | 4.154577 | 13.5833 | 3.763766 | 2.10e+01 | 4.46e+00 | NA | NA | NA | NA | 0 | 0 | 2.40e+01 | 4.64e+00 | NA | NA | NA | NA | 0 | 0 | 3.74e+02 | 8.55e+00 | NA | NA | NA | NA | 0 | 0 | 3.26e+02 | 8.35e+00 | NA | NA | NA | NA | 0 | 0 | 2.10e+01 | 4.46e+00 | 2.40e+01 | 4.64e+00 | 3.74e+02 | 8.55e+00 | 3.26e+02 | 8.35e+00 | | chr6 | 32407618 | 32412826 | uc003obh.3 | 0.4285 | + | HLA-DRA | protein_coding | 2.20e-03 | 3.53e-14 | 7.14e-03 | 8.22e-07 | 2.20e-04 | 0.0767 | -3.704621 | 0.0590 | -4.083768 | 6.91e+02 | 9.43e+00 | NA | NA | NA | NA | 0 | 0 | 7.80e+02 | 9.61e+00 | NA | NA | NA | NA | 0 | 0 | 5.30e+01 | 5.75e+00 | NA | NA | NA | NA | 0 | 0 | 4.60e+01 | 5.55e+00 | NA | NA | NA | NA | 0 | 0 | 6.91e+02 | 9.43e+00 | 7.80e+02 | 9.61e+00 | 5.30e+01 | 5.75e+00 | 4.60e+01 | 5.55e+00 | | chr3 | 49842637 | 49851391 | uc003cxr.3 | 0.5808 | - | UBA7 | protein_coding | 5.14e-04 | 5.67e-13 | 2.08e-03 | 8.46e-07 | 2.20e-04 | 0.0987 | -3.341104 | 0.0763 | -3.712028 | 1.44e+03 | 1.05e+01 | NA | NA | NA | NA | 0 | 0 | 1.62e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 1.42e+02 | 7.16e+00 | NA | NA | NA | NA | 0 | 0 | 1.24e+02 | 6.97e+00 | NA | NA | NA | NA | 0 | 0 | 1.44e+03 | 1.05e+01 | 1.62e+03 | 1.07e+01 | 1.42e+02 | 7.16e+00 | 1.24e+02 | 6.97e+00 | | chr16 | 2653384 | 2667132 | uc002cqx.3 | 0.5651 | + | LOC652276 | processed_transcript | 1.32e-03 | 1.84e-13 | 4.44e-03 | 1.03e-06 | 2.60e-04 | 11.1667 | 3.481127 | 8.6000 | 3.104337 | 8.40e+01 | 6.41e+00 | NA | NA | NA | NA | 0 | 0 | 9.50e+01 | 6.58e+00 | NA | NA | NA | NA | 0 | 0 | 9.38e+02 | 9.87e+00 | NA | NA | NA | NA | 0 | 0 | 8.17e+02 | 9.68e+00 | NA | NA | NA | NA | 0 | 0 | 8.40e+01 | 6.41e+00 | 9.50e+01 | 6.58e+00 | 9.38e+02 | 9.87e+00 | 8.17e+02 | 9.68e+00 | | chr17 | 7387697 | 7417935 | uc002ghf.4 | 0.4967 | + | POLR2A | protein_coding | 1.29e-04 | 3.07e-10 | 4.15e-05 | 1.18e-06 | 2.91e-04 | 6.7761 | 2.760445 | 5.2287 | 2.386465 | 2.19e+03 | 1.11e+01 | NA | NA | NA | NA | 0 | 0 | 2.47e+03 | 1.13e+01 | NA | NA | NA | NA | 0 | 0 | 1.48e+04 | 1.39e+01 | NA | NA | NA | NA | 0 | 0 | 1.29e+04 | 1.37e+01 | NA | NA | NA | NA | 0 | 0 | 2.19e+03 | 1.11e+01 | 2.47e+03 | 1.13e+01 | 1.48e+04 | 1.39e+01 | 1.29e+04 | 1.37e+01 | | chr21 | 46875423 | 46933634 | uc002zhi.3 | 0.6027 | + | COL18A1 | protein_coding | 1.64e-04 | 6.58e-11 | 1.71e-04 | 1.23e-06 | 2.92e-04 | 0.1345 | -2.894520 | 0.1037 | -3.269511 | 5.46e+03 | 1.24e+01 | NA | NA | NA | NA | 0 | 0 | 6.16e+03 | 1.26e+01 | NA | NA | NA | NA | 0 | 0 | 7.34e+02 | 9.52e+00 | NA | NA | NA | NA | 0 | 0 | 6.39e+02 | 9.32e+00 | NA | NA | NA | NA | 0 | 0 | 5.46e+03 | 1.24e+01 | 6.16e+03 | 1.26e+01 | 7.34e+02 | 9.52e+00 | 6.39e+02 | 9.32e+00 | | chr5 | 52083773 | 52249485 | uc003jou.3 | 0.3679 | + | ITGA1 | protein_coding | 6.07e-04 | 1.72e-12 | 1.93e-03 | 1.26e-06 | 2.92e-04 | 0.1058 | -3.241268 | 0.0814 | -3.619151 | 1.51e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 1.71e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 1.60e+02 | 7.33e+00 | NA | NA | NA | NA | 0 | 0 | 1.39e+02 | 7.13e+00 | NA | NA | NA | NA | 0 | 0 | 1.51e+03 | 1.06e+01 | 1.71e+03 | 1.07e+01 | 1.60e+02 | 7.33e+00 | 1.39e+02 | 7.13e+00 | | chr6 | 1312674 | 1314993 | uc003mtl.4 | 0.6211 | + | FOXQ1 | protein_coding | 3.77e-03 | 6.36e-14 | 8.66e-03 | 1.28e-06 | 2.92e-04 | 12.4694 | 3.640319 | 9.6727 | 3.273923 | 4.90e+01 | 5.64e+00 | NA | NA | NA | NA | 0 | 0 | 5.50e+01 | 5.81e+00 | NA | NA | NA | NA | 0 | 0 | 6.11e+02 | 9.26e+00 | NA | NA | NA | NA | 0 | 0 | 5.32e+02 | 9.06e+00 | NA | NA | NA | NA | 0 | 0 | 4.90e+01 | 5.64e+00 | 5.50e+01 | 5.81e+00 | 6.11e+02 | 9.26e+00 | 5.32e+02 | 9.06e+00 | | chr1 | 212781969 | 212794119 | uc021pit.1 | 0.4890 | + | ATF3 | protein_coding | 1.88e-03 | 2.58e-13 | 5.29e-03 | 1.37e-06 | 3.04e-04 | 11.1184 | 3.474880 | 8.5581 | 3.097297 | 7.60e+01 | 6.27e+00 | NA | NA | NA | NA | 0 | 0 | 8.60e+01 | 6.44e+00 | NA | NA | NA | NA | 0 | 0 | 8.45e+02 | 9.72e+00 | NA | NA | NA | NA | 0 | 0 | 7.36e+02 | 9.53e+00 | NA | NA | NA | NA | 0 | 0 | 7.60e+01 | 6.27e+00 | 8.60e+01 | 6.44e+00 | 8.45e+02 | 9.72e+00 | 7.36e+02 | 9.53e+00 | | chr5 | 111064999 | 111312628 | uc011cvr.2 | 0.3803 | - | NREP | protein_coding | 1.27e-03 | 5.75e-13 | 3.89e-03 | 1.42e-06 | 3.04e-04 | 0.0956 | -3.386698 | 0.0735 | -3.766782 | 1.02e+03 | 1.00e+01 | NA | NA | NA | NA | 0 | 0 | 1.16e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 9.80e+01 | 6.63e+00 | NA | NA | NA | NA | 0 | 0 | 8.50e+01 | 6.43e+00 | NA | NA | NA | NA | 0 | 0 | 1.02e+03 | 1.00e+01 | 1.16e+03 | 1.02e+01 | 9.80e+01 | 6.63e+00 | 8.50e+01 | 6.43e+00 | | chr17 | 41003200 | 41010147 | uc002ibv.4 | 0.5435 | + | AOC3 | protein_coding | 1.84e-03 | 3.09e-13 | 5.04e-03 | 1.42e-06 | 3.04e-04 | 10.8148 | 3.434937 | 8.3846 | 3.067745 | 8.10e+01 | 6.36e+00 | NA | NA | NA | NA | 0 | 0 | 9.10e+01 | 6.52e+00 | NA | NA | NA | NA | 0 | 0 | 8.76e+02 | 9.78e+00 | NA | NA | NA | NA | 0 | 0 | 7.63e+02 | 9.58e+00 | NA | NA | NA | NA | 0 | 0 | 8.10e+01 | 6.36e+00 | 9.10e+01 | 6.52e+00 | 8.76e+02 | 9.78e+00 | 7.63e+02 | 9.58e+00 | | chr17 | 40996608 | 41002724 | uc002ibu.3 | 0.5246 | + | AOC2 | protein_coding | 1.40e-03 | 1.86e-12 | 3.54e-03 | 2.10e-06 | 4.39e-04 | 9.6814 | 3.275218 | 7.4453 | 2.896332 | 1.13e+02 | 6.83e+00 | NA | NA | NA | NA | 0 | 0 | 1.28e+02 | 7.01e+00 | NA | NA | NA | NA | 0 | 0 | 1.09e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 9.53e+02 | 9.90e+00 | NA | NA | NA | NA | 0 | 0 | 1.13e+02 | 6.83e+00 | 1.28e+02 | 7.01e+00 | 1.09e+03 | 1.01e+01 | 9.53e+02 | 9.90e+00 | | chr9 | 42717233 | 42720342 | uc004acn.3 | 0.5424 | + | FOXD4L4 | protein_coding | 1.40e-02 | 4.09e-14 | 1.92e-02 | 2.22e-06 | 4.46e-04 | 15.5455 | 3.958421 | 11.9200 | 3.575312 | 2.20e+01 | 4.52e+00 | NA | NA | NA | NA | 0 | 0 | 2.50e+01 | 4.70e+00 | NA | NA | NA | NA | 0 | 0 | 3.42e+02 | 8.42e+00 | NA | NA | NA | NA | 0 | 0 | 2.98e+02 | 8.22e+00 | NA | NA | NA | NA | 0 | 0 | 2.20e+01 | 4.52e+00 | 2.50e+01 | 4.70e+00 | 3.42e+02 | 8.42e+00 | 2.98e+02 | 8.22e+00 | | chr9 | 70426622 | 70429731 | uc004afx.1 | 0.5424 | - | FOXD4L4 | protein_coding | 1.40e-02 | 4.09e-14 | 1.92e-02 | 2.22e-06 | 4.46e-04 | 15.5455 | 3.958421 | 11.9200 | 3.575312 | 2.20e+01 | 4.52e+00 | NA | NA | NA | NA | 0 | 0 | 2.50e+01 | 4.70e+00 | NA | NA | NA | NA | 0 | 0 | 3.42e+02 | 8.42e+00 | NA | NA | NA | NA | 0 | 0 | 2.98e+02 | 8.22e+00 | NA | NA | NA | NA | 0 | 0 | 2.20e+01 | 4.52e+00 | 2.50e+01 | 4.70e+00 | 3.42e+02 | 8.42e+00 | 2.98e+02 | 8.22e+00 | | chr5 | 176734205 | 176739292 | uc003mgb.2 | 0.6093 | - | MXD3 | protein_coding | 9.69e-04 | 6.57e-12 | 2.23e-03 | 2.42e-06 | 4.76e-04 | 0.1131 | -3.143803 | 0.0872 | -3.519973 | 1.42e+03 | 1.05e+01 | NA | NA | NA | NA | 0 | 0 | 1.61e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 1.61e+02 | 7.34e+00 | NA | NA | NA | NA | 0 | 0 | 1.40e+02 | 7.14e+00 | NA | NA | NA | NA | 0 | 0 | 1.42e+03 | 1.05e+01 | 1.61e+03 | 1.07e+01 | 1.61e+02 | 7.34e+00 | 1.40e+02 | 7.14e+00 | | chr9 | 70175706 | 70178815 | uc010moc.3 | 0.5424 | - | FOXD4L5 | protein_coding | 1.76e-02 | 4.45e-14 | 2.23e-02 | 2.60e-06 | 5.00e-04 | 16.2105 | 4.018859 | 12.7619 | 3.673772 | 1.90e+01 | 4.32e+00 | NA | NA | NA | NA | 0 | 0 | 2.10e+01 | 4.46e+00 | NA | NA | NA | NA | 0 | 0 | 3.08e+02 | 8.27e+00 | NA | NA | NA | NA | 0 | 0 | 2.68e+02 | 8.07e+00 | NA | NA | NA | NA | 0 | 0 | 1.90e+01 | 4.32e+00 | 2.10e+01 | 4.46e+00 | 3.08e+02 | 8.27e+00 | 2.68e+02 | 8.07e+00 | | chr4 | 57897236 | 57976551 | uc003hcn.3 | 0.4246 | - | IGFBP7 | protein_coding | 2.59e-04 | 2.26e-09 | 4.15e-05 | 2.90e-06 | 5.30e-04 | 0.1644 | -2.604919 | 0.1268 | -2.979040 | 1.69e+04 | 1.40e+01 | NA | NA | NA | NA | 0 | 0 | 1.91e+04 | 1.42e+01 | NA | NA | NA | NA | 0 | 0 | 2.78e+03 | 1.14e+01 | NA | NA | NA | NA | 0 | 0 | 2.42e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 1.69e+04 | 1.40e+01 | 1.91e+04 | 1.42e+01 | 2.78e+03 | 1.14e+01 | 2.42e+03 | 1.12e+01 | | chr4 | 166300096 | 166419482 | uc003irg.4 | 0.3831 | + | CPE | protein_coding | 8.54e-04 | 1.83e-11 | 1.57e-03 | 2.90e-06 | 5.30e-04 | 0.1207 | -3.050010 | 0.0932 | -3.423975 | 1.67e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 1.89e+03 | 1.09e+01 | NA | NA | NA | NA | 0 | 0 | 2.02e+02 | 7.67e+00 | NA | NA | NA | NA | 0 | 0 | 1.76e+02 | 7.47e+00 | NA | NA | NA | NA | 0 | 0 | 1.67e+03 | 1.07e+01 | 1.89e+03 | 1.09e+01 | 2.02e+02 | 7.67e+00 | 1.76e+02 | 7.47e+00 | | chr10 | 45455218 | 45490172 | uc001jbo.3 | 0.5326 | + | RASSF4 | retained_intron | 1.28e-03 | 7.03e-12 | 2.76e-03 | 2.92e-06 | 5.30e-04 | 0.1118 | -3.160801 | 0.0864 | -3.532205 | 1.26e+03 | 1.03e+01 | NA | NA | NA | NA | 0 | 0 | 1.42e+03 | 1.05e+01 | NA | NA | NA | NA | 0 | 0 | 1.41e+02 | 7.15e+00 | NA | NA | NA | NA | 0 | 0 | 1.23e+02 | 6.95e+00 | NA | NA | NA | NA | 0 | 0 | 1.26e+03 | 1.03e+01 | 1.42e+03 | 1.05e+01 | 1.41e+02 | 7.15e+00 | 1.23e+02 | 6.95e+00 | | chr5 | 137801180 | 137805004 | uc003ldb.1 | 0.5655 | + | EGR1 | protein_coding | 9.28e-04 | 2.52e-11 | 1.54e-03 | 3.30e-06 | 5.89e-04 | 8.0762 | 3.013675 | 6.2321 | 2.639711 | 2.10e+02 | 7.72e+00 | NA | NA | NA | NA | 0 | 0 | 2.37e+02 | 7.89e+00 | NA | NA | NA | NA | 0 | 0 | 1.70e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 1.48e+03 | 1.05e+01 | NA | NA | NA | NA | 0 | 0 | 2.10e+02 | 7.72e+00 | 2.37e+02 | 7.89e+00 | 1.70e+03 | 1.07e+01 | 1.48e+03 | 1.05e+01 | | chr8 | 23699433 | 23712320 | uc003xdw.1 | 0.4380 | - | STC1 | protein_coding | 6.28e-03 | 8.69e-13 | 9.56e-03 | 3.74e-06 | 6.39e-04 | 0.0895 | -3.482393 | 0.0683 | -3.871485 | 5.70e+02 | 9.16e+00 | NA | NA | NA | NA | 0 | 0 | 6.44e+02 | 9.33e+00 | NA | NA | NA | NA | 0 | 0 | 5.10e+01 | 5.70e+00 | NA | NA | NA | NA | 0 | 0 | 4.40e+01 | 5.49e+00 | NA | NA | NA | NA | 0 | 0 | 5.70e+02 | 9.16e+00 | 6.44e+02 | 9.33e+00 | 5.10e+01 | 5.70e+00 | 4.40e+01 | 5.49e+00 | | chr10 | 71561643 | 71718904 | uc001jql.3 | 0.5193 | + | COL13A1 | protein_coding | 3.48e-04 | 3.64e-09 | 4.15e-05 | 3.75e-06 | 6.39e-04 | 0.1686 | -2.567957 | 0.1301 | -2.942110 | 1.32e+04 | 1.37e+01 | NA | NA | NA | NA | 0 | 0 | 1.49e+04 | 1.39e+01 | NA | NA | NA | NA | 0 | 0 | 2.23e+03 | 1.11e+01 | NA | NA | NA | NA | 0 | 0 | 1.94e+03 | 1.09e+01 | NA | NA | NA | NA | 0 | 0 | 1.32e+04 | 1.37e+01 | 1.49e+04 | 1.39e+01 | 2.23e+03 | 1.11e+01 | 1.94e+03 | 1.09e+01 | | chr6 | 144471653 | 144513076 | uc003qks.4 | 0.4092 | + | STX11 | protein_coding | 1.89e-02 | 1.25e-13 | 2.29e-02 | 3.78e-06 | 6.39e-04 | 15.9474 | 3.995246 | 12.0000 | 3.584963 | 1.90e+01 | 4.32e+00 | NA | NA | NA | NA | 0 | 0 | 2.20e+01 | 4.52e+00 | NA | NA | NA | NA | 0 | 0 | 3.03e+02 | 8.25e+00 | NA | NA | NA | NA | 0 | 0 | 2.64e+02 | 8.05e+00 | NA | NA | NA | NA | 0 | 0 | 1.90e+01 | 4.32e+00 | 2.20e+01 | 4.52e+00 | 3.03e+02 | 8.25e+00 | 2.64e+02 | 8.05e+00 | | chr13 | 114523521 | 114567046 | uc001vud.3 | 0.5760 | - | GAS6 | protein_coding | 2.98e-04 | 5.04e-09 | 4.15e-05 | 3.97e-06 | 6.58e-04 | 0.1721 | -2.539045 | 0.1328 | -2.913132 | 2.93e+04 | 1.48e+01 | NA | NA | NA | NA | 0 | 0 | 3.31e+04 | 1.50e+01 | NA | NA | NA | NA | 0 | 0 | 5.05e+03 | 1.23e+01 | NA | NA | NA | NA | 0 | 0 | 4.40e+03 | 1.21e+01 | NA | NA | NA | NA | 0 | 0 | 2.93e+04 | 1.48e+01 | 3.31e+04 | 1.50e+01 | 5.05e+03 | 1.23e+01 | 4.40e+03 | 1.21e+01 | | chr1 | 32799429 | 32801840 | uc001bvd.4 | 0.6372 | - | MARCKSL1 | protein_coding | 5.34e-04 | 4.60e-10 | 3.79e-04 | 4.53e-06 | 7.39e-04 | 0.1481 | -2.755691 | 0.1142 | -3.130974 | 3.59e+03 | 1.18e+01 | NA | NA | NA | NA | 0 | 0 | 4.06e+03 | 1.20e+01 | NA | NA | NA | NA | 0 | 0 | 5.32e+02 | 9.06e+00 | NA | NA | NA | NA | 0 | 0 | 4.63e+02 | 8.86e+00 | NA | NA | NA | NA | 0 | 0 | 3.59e+03 | 1.18e+01 | 4.06e+03 | 1.20e+01 | 5.32e+02 | 9.06e+00 | 4.63e+02 | 8.86e+00 | | chr11 | 43918852 | 43921424 | uc010rfk.3 | 0.4819 | + | SEC14L1P1 | processed_pseudogene | 1.01e-02 | 8.01e-13 | 1.22e-02 | 4.63e-06 | 7.43e-04 | 11.2093 | 3.486625 | 8.7500 | 3.129283 | 4.30e+01 | 5.46e+00 | NA | NA | NA | NA | 0 | 0 | 4.80e+01 | 5.61e+00 | NA | NA | NA | NA | 0 | 0 | 4.82e+02 | 8.92e+00 | NA | NA | NA | NA | 0 | 0 | 4.20e+02 | 8.72e+00 | NA | NA | NA | NA | 0 | 0 | 4.30e+01 | 5.46e+00 | 4.80e+01 | 5.61e+00 | 4.82e+02 | 8.92e+00 | 4.20e+02 | 8.72e+00 | | chr4 | 8271488 | 8308838 | uc003gla.3 | 0.5608 | + | HTRA3 | protein_coding | 1.47e-02 | 4.11e-13 | 1.81e-02 | 4.78e-06 | 7.55e-04 | 0.0720 | -3.795415 | 0.0565 | -4.145323 | 3.61e+02 | 8.50e+00 | NA | NA | NA | NA | 0 | 0 | 4.07e+02 | 8.67e+00 | NA | NA | NA | NA | 0 | 0 | 2.60e+01 | 4.75e+00 | NA | NA | NA | NA | 0 | 0 | 2.30e+01 | 4.58e+00 | NA | NA | NA | NA | 0 | 0 | 3.61e+02 | 8.50e+00 | 4.07e+02 | 8.67e+00 | 2.60e+01 | 4.75e+00 | 2.30e+01 | 4.58e+00 | | chr1 | 196621007 | 196716634 | uc001gtj.4 | 0.3520 | + | CFH | protein_coding | 2.08e-03 | 1.67e-11 | 3.47e-03 | 4.95e-06 | 7.68e-04 | 0.1163 | -3.104337 | 0.0895 | -3.481317 | 1.12e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 1.26e+03 | 1.03e+01 | NA | NA | NA | NA | 0 | 0 | 1.30e+02 | 7.03e+00 | NA | NA | NA | NA | 0 | 0 | 1.13e+02 | 6.83e+00 | NA | NA | NA | NA | 0 | 0 | 1.12e+03 | 1.01e+01 | 1.26e+03 | 1.03e+01 | 1.30e+02 | 7.03e+00 | 1.13e+02 | 6.83e+00 | | chr1 | 55505148 | 55530526 | uc001cyf.2 | 0.5555 | + | PCSK9 | protein_coding | 8.46e-04 | 2.91e-10 | 7.37e-04 | 5.66e-06 | 8.65e-04 | 0.1427 | -2.808536 | 0.1101 | -3.182525 | 2.44e+03 | 1.13e+01 | NA | NA | NA | NA | 0 | 0 | 2.76e+03 | 1.14e+01 | NA | NA | NA | NA | 0 | 0 | 3.49e+02 | 8.45e+00 | NA | NA | NA | NA | 0 | 0 | 3.04e+02 | 8.25e+00 | NA | NA | NA | NA | 0 | 0 | 2.44e+03 | 1.13e+01 | 2.76e+03 | 1.14e+01 | 3.49e+02 | 8.45e+00 | 3.04e+02 | 8.25e+00 | | chr19 | 54385466 | 54410901 | uc002qcq.1 | 0.5280 | + | PRKCG | protein_coding | 1.36e-02 | 1.58e-12 | 1.44e-02 | 6.76e-06 | 1.01e-03 | 11.3158 | 3.500265 | 8.7209 | 3.124482 | 3.80e+01 | 5.29e+00 | NA | NA | NA | NA | 0 | 0 | 4.30e+01 | 5.46e+00 | NA | NA | NA | NA | 0 | 0 | 4.30e+02 | 8.75e+00 | NA | NA | NA | NA | 0 | 0 | 3.75e+02 | 8.55e+00 | NA | NA | NA | NA | 0 | 0 | 3.80e+01 | 5.29e+00 | 4.30e+01 | 5.46e+00 | 4.30e+02 | 8.75e+00 | 3.75e+02 | 8.55e+00 | | chr1 | 117057155 | 117113715 | uc001egm.3 | 0.4166 | - | CD58 | protein_coding | 9.93e-04 | 3.97e-10 | 8.15e-04 | 6.85e-06 | 1.01e-03 | 0.1450 | -2.785981 | 0.1118 | -3.160689 | 2.34e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 2.65e+03 | 1.14e+01 | NA | NA | NA | NA | 0 | 0 | 3.40e+02 | 8.41e+00 | NA | NA | NA | NA | 0 | 0 | 2.96e+02 | 8.21e+00 | NA | NA | NA | NA | 0 | 0 | 2.34e+03 | 1.12e+01 | 2.65e+03 | 1.14e+01 | 3.40e+02 | 8.41e+00 | 2.96e+02 | 8.21e+00 | | chr9 | 139746818 | 139755251 | uc004cjs.3 | 0.6660 | + | MAMDC4 | protein_coding | 6.19e-03 | 7.30e-12 | 8.05e-03 | 7.14e-06 | 1.03e-03 | 0.1042 | -3.262163 | 0.0803 | -3.638074 | 6.62e+02 | 9.37e+00 | NA | NA | NA | NA | 0 | 0 | 7.47e+02 | 9.55e+00 | NA | NA | NA | NA | 0 | 0 | 6.90e+01 | 6.13e+00 | NA | NA | NA | NA | 0 | 0 | 6.00e+01 | 5.93e+00 | NA | NA | NA | NA | 0 | 0 | 6.62e+02 | 9.37e+00 | 7.47e+02 | 9.55e+00 | 6.90e+01 | 6.13e+00 | 6.00e+01 | 5.93e+00 | | chr9 | 8314245 | 10612723 | uc003zkk.3 | 0.3553 | - | PTPRD | protein_coding | 2.12e-02 | 7.80e-13 | 2.22e-02 | 7.17e-06 | 1.03e-03 | 0.0705 | -3.825971 | 0.0540 | -4.211504 | 3.12e+02 | 8.29e+00 | NA | NA | NA | NA | 0 | 0 | 3.52e+02 | 8.46e+00 | NA | NA | NA | NA | 0 | 0 | 2.20e+01 | 4.52e+00 | NA | NA | NA | NA | 0 | 0 | 1.90e+01 | 4.32e+00 | NA | NA | NA | NA | 0 | 0 | 3.12e+02 | 8.29e+00 | 3.52e+02 | 8.46e+00 | 2.20e+01 | 4.52e+00 | 1.90e+01 | 4.32e+00 | | chr6 | 6144310 | 6320924 | uc003mwv.3 | 0.4170 | - | F13A1 | protein_coding | 2.10e-02 | 9.03e-13 | 2.16e-02 | 7.44e-06 | 1.04e-03 | 0.0723 | -3.789321 | 0.0557 | -4.165912 | 3.18e+02 | 8.32e+00 | NA | NA | NA | NA | 0 | 0 | 3.59e+02 | 8.49e+00 | NA | NA | NA | NA | 0 | 0 | 2.30e+01 | 4.58e+00 | NA | NA | NA | NA | 0 | 0 | 2.00e+01 | 4.39e+00 | NA | NA | NA | NA | 0 | 0 | 3.18e+02 | 8.32e+00 | 3.59e+02 | 8.49e+00 | 2.30e+01 | 4.58e+00 | 2.00e+01 | 4.39e+00 | | chr11 | 6340175 | 6341740 | uc001mcu.1 | 0.6462 | - | CAVIN3 | protein_coding | 1.95e-03 | 8.72e-11 | 2.48e-03 | 7.49e-06 | 1.04e-03 | 0.1301 | -2.942119 | 0.1004 | -3.316333 | 1.37e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.54e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 1.78e+02 | 7.48e+00 | NA | NA | NA | NA | 0 | 0 | 1.55e+02 | 7.29e+00 | NA | NA | NA | NA | 0 | 0 | 1.37e+03 | 1.04e+01 | 1.54e+03 | 1.06e+01 | 1.78e+02 | 7.48e+00 | 1.55e+02 | 7.29e+00 | | chr17 | 62120389 | 62207502 | uc002jdz.2 | 0.4496 | - | ERN1 | protein_coding | 1.94e-03 | 9.30e-11 | 2.42e-03 | 7.59e-06 | 1.04e-03 | 7.6264 | 2.930997 | 5.8689 | 2.553098 | 1.82e+02 | 7.52e+00 | NA | NA | NA | NA | 0 | 0 | 2.06e+02 | 7.69e+00 | NA | NA | NA | NA | 0 | 0 | 1.39e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.21e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 1.82e+02 | 7.52e+00 | 2.06e+02 | 7.69e+00 | 1.39e+03 | 1.04e+01 | 1.21e+03 | 1.02e+01 | | chr2 | 216225178 | 216300791 | uc002vfa.3 | 0.3939 | - | FN1 | protein_coding | 4.51e-04 | 2.29e-08 | 4.67e-05 | 7.84e-06 | 1.06e-03 | 0.1877 | -2.413829 | 0.1448 | -2.787819 | 1.96e+05 | 1.76e+01 | NA | NA | NA | NA | 0 | 0 | 2.21e+05 | 1.78e+01 | NA | NA | NA | NA | 0 | 0 | 3.68e+04 | 1.52e+01 | NA | NA | NA | NA | 0 | 0 | 3.21e+04 | 1.50e+01 | NA | NA | NA | NA | 0 | 0 | 1.96e+05 | 1.76e+01 | 2.21e+05 | 1.78e+01 | 3.68e+04 | 1.52e+01 | 3.21e+04 | 1.50e+01 | | chr3 | 48555116 | 48594227 | uc003ctv.3 | 0.5117 | - | PFKFB4 | protein_coding | 8.49e-04 | 1.14e-09 | 5.14e-04 | 7.92e-06 | 1.06e-03 | 0.1550 | -2.689482 | 0.1196 | -3.063909 | 3.15e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 3.55e+03 | 1.18e+01 | NA | NA | NA | NA | 0 | 0 | 4.88e+02 | 8.93e+00 | NA | NA | NA | NA | 0 | 0 | 4.25e+02 | 8.73e+00 | NA | NA | NA | NA | 0 | 0 | 3.15e+03 | 1.16e+01 | 3.55e+03 | 1.18e+01 | 4.88e+02 | 8.93e+00 | 4.25e+02 | 8.73e+00 | | chr1 | 153516094 | 153518282 | uc001fbz.3 | 0.5363 | - | S100A4 | protein_coding | 9.83e-04 | 1.03e-09 | 6.28e-04 | 8.61e-06 | 1.14e-03 | 0.1539 | -2.699926 | 0.1186 | -3.075223 | 2.81e+03 | 1.15e+01 | NA | NA | NA | NA | 0 | 0 | 3.17e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 4.32e+02 | 8.76e+00 | NA | NA | NA | NA | 0 | 0 | 3.76e+02 | 8.56e+00 | NA | NA | NA | NA | 0 | 0 | 2.81e+03 | 1.15e+01 | 3.17e+03 | 1.16e+01 | 4.32e+02 | 8.76e+00 | 3.76e+02 | 8.56e+00 | | chr2 | 220415449 | 220436268 | uc010fwk.3 | 0.5817 | - | OBSL1 | protein_coding | 7.45e-04 | 4.80e-09 | 1.92e-04 | 8.82e-06 | 1.15e-03 | 0.1697 | -2.558551 | 0.1309 | -2.933199 | 5.20e+03 | 1.23e+01 | NA | NA | NA | NA | 0 | 0 | 5.87e+03 | 1.25e+01 | NA | NA | NA | NA | 0 | 0 | 8.82e+02 | 9.79e+00 | NA | NA | NA | NA | 0 | 0 | 7.68e+02 | 9.59e+00 | NA | NA | NA | NA | 0 | 0 | 5.20e+03 | 1.23e+01 | 5.87e+03 | 1.25e+01 | 8.82e+02 | 9.79e+00 | 7.68e+02 | 9.59e+00 | | chr5 | 169290718 | 169407744 | uc003mag.2 | 0.4362 | - | FAM196B | protein_coding | 2.00e-02 | 2.31e-12 | 1.80e-02 | 9.39e-06 | 1.21e-03 | 11.5000 | 3.523562 | 8.9167 | 3.156504 | 3.20e+01 | 5.04e+00 | NA | NA | NA | NA | 0 | 0 | 3.60e+01 | 5.21e+00 | NA | NA | NA | NA | 0 | 0 | 3.68e+02 | 8.53e+00 | NA | NA | NA | NA | 0 | 0 | 3.21e+02 | 8.33e+00 | NA | NA | NA | NA | 0 | 0 | 3.20e+01 | 5.04e+00 | 3.60e+01 | 5.21e+00 | 3.68e+02 | 8.53e+00 | 3.21e+02 | 8.33e+00 | | chr4 | 78078356 | 78091213 | uc003hkq.4 | 0.4128 | + | CCNG2 | protein_coding | 3.96e-03 | 4.81e-11 | 4.80e-03 | 9.71e-06 | 1.23e-03 | 0.1214 | -3.042458 | 0.0932 | -3.422837 | 9.31e+02 | 9.86e+00 | NA | NA | NA | NA | 0 | 0 | 1.05e+03 | 1.00e+01 | NA | NA | NA | NA | 0 | 0 | 1.13e+02 | 6.83e+00 | NA | NA | NA | NA | 0 | 0 | 9.80e+01 | 6.63e+00 | NA | NA | NA | NA | 0 | 0 | 9.31e+02 | 9.86e+00 | 1.05e+03 | 1.00e+01 | 1.13e+02 | 6.83e+00 | 9.80e+01 | 6.63e+00 | | chr6 | 86159301 | 86205509 | uc003pko.4 | 0.4307 | + | NT5E | protein_coding | 7.73e-04 | 3.74e-08 | 4.67e-05 | 1.11e-05 | 1.38e-03 | 0.1926 | -2.376269 | 0.1486 | -2.750463 | 1.66e+04 | 1.40e+01 | NA | NA | NA | NA | 0 | 0 | 1.87e+04 | 1.42e+01 | NA | NA | NA | NA | 0 | 0 | 3.19e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 2.78e+03 | 1.14e+01 | NA | NA | NA | NA | 0 | 0 | 1.66e+04 | 1.40e+01 | 1.87e+04 | 1.42e+01 | 3.19e+03 | 1.16e+01 | 2.78e+03 | 1.14e+01 | | chr9 | 97021577 | 97065291 | uc004aum.1 | 0.4159 | + | ZNF169 | protein_coding | 1.36e-02 | 8.44e-12 | 1.25e-02 | 1.13e-05 | 1.39e-03 | 9.9583 | 3.315904 | 7.7037 | 2.945552 | 4.80e+01 | 5.61e+00 | NA | NA | NA | NA | 0 | 0 | 5.40e+01 | 5.78e+00 | NA | NA | NA | NA | 0 | 0 | 4.78e+02 | 8.90e+00 | NA | NA | NA | NA | 0 | 0 | 4.16e+02 | 8.70e+00 | NA | NA | NA | NA | 0 | 0 | 4.80e+01 | 5.61e+00 | 5.40e+01 | 5.78e+00 | 4.78e+02 | 8.90e+00 | 4.16e+02 | 8.70e+00 | | chr3 | 33131907 | 33138314 | uc003cfk.2 | 0.5005 | - | TMPPE | protein_coding | 1.29e-02 | 1.49e-11 | 1.13e-02 | 1.29e-05 | 1.57e-03 | 9.2857 | 3.215013 | 7.1905 | 2.846087 | 5.60e+01 | 5.83e+00 | NA | NA | NA | NA | 0 | 0 | 6.30e+01 | 6.00e+00 | NA | NA | NA | NA | 0 | 0 | 5.20e+02 | 9.03e+00 | NA | NA | NA | NA | 0 | 0 | 4.53e+02 | 8.83e+00 | NA | NA | NA | NA | 0 | 0 | 5.60e+01 | 5.83e+00 | 6.30e+01 | 6.00e+00 | 5.20e+02 | 9.03e+00 | 4.53e+02 | 8.83e+00 | | chr2 | 179328390 | 179343355 | uc002umk.3 | 0.3764 | - | FKBP7 | protein_coding | 1.09e-02 | 1.90e-11 | 1.06e-02 | 1.30e-05 | 1.57e-03 | 0.1052 | -3.249259 | 0.0817 | -3.613532 | 5.42e+02 | 9.08e+00 | NA | NA | NA | NA | 0 | 0 | 6.12e+02 | 9.26e+00 | NA | NA | NA | NA | 0 | 0 | 5.70e+01 | 5.86e+00 | NA | NA | NA | NA | 0 | 0 | 5.00e+01 | 5.67e+00 | NA | NA | NA | NA | 0 | 0 | 5.42e+02 | 9.08e+00 | 6.12e+02 | 9.26e+00 | 5.70e+01 | 5.86e+00 | 5.00e+01 | 5.67e+00 | | chr10 | 62538211 | 62554610 | uc001jld.3 | 0.3488 | + | CDK1 | protein_coding | 1.09e-03 | 1.54e-08 | 1.92e-04 | 1.48e-05 | 1.76e-03 | 0.1819 | -2.458760 | 0.1404 | -2.832801 | 5.37e+03 | 1.24e+01 | NA | NA | NA | NA | 0 | 0 | 6.06e+03 | 1.26e+01 | NA | NA | NA | NA | 0 | 0 | 9.77e+02 | 9.93e+00 | NA | NA | NA | NA | 0 | 0 | 8.51e+02 | 9.73e+00 | NA | NA | NA | NA | 0 | 0 | 5.37e+03 | 1.24e+01 | 6.06e+03 | 1.26e+01 | 9.77e+02 | 9.93e+00 | 8.51e+02 | 9.73e+00 | | chr7 | 2559478 | 2568063 | uc003smf.3 | 0.6427 | + | LFNG | protein_coding | 2.31e-03 | 8.87e-10 | 1.80e-03 | 1.54e-05 | 1.81e-03 | 0.1494 | -2.742504 | 0.1152 | -3.117540 | 1.65e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 1.87e+03 | 1.09e+01 | NA | NA | NA | NA | 0 | 0 | 2.47e+02 | 7.95e+00 | NA | NA | NA | NA | 0 | 0 | 2.15e+02 | 7.75e+00 | NA | NA | NA | NA | 0 | 0 | 1.65e+03 | 1.07e+01 | 1.87e+03 | 1.09e+01 | 2.47e+02 | 7.95e+00 | 2.15e+02 | 7.75e+00 | | chr3 | 111260925 | 111371206 | uc003dxx.3 | 0.3905 | + | CD96 | protein_coding | 1.44e-02 | 2.72e-11 | 1.19e-02 | 1.67e-05 | 1.94e-03 | 0.1080 | -3.210897 | 0.0832 | -3.587518 | 5.00e+02 | 8.97e+00 | NA | NA | NA | NA | 0 | 0 | 5.65e+02 | 9.14e+00 | NA | NA | NA | NA | 0 | 0 | 5.40e+01 | 5.78e+00 | NA | NA | NA | NA | 0 | 0 | 4.70e+01 | 5.58e+00 | NA | NA | NA | NA | 0 | 0 | 5.00e+02 | 8.97e+00 | 5.65e+02 | 9.14e+00 | 5.40e+01 | 5.78e+00 | 4.70e+01 | 5.58e+00 | | chr9 | 140317846 | 140328858 | uc004cmu.3 | 0.6226 | + | NOXA1 | protein_coding | 2.08e-02 | 1.75e-11 | 1.66e-02 | 1.82e-05 | 2.09e-03 | 0.0967 | -3.370458 | 0.0743 | -3.750022 | 3.93e+02 | 8.62e+00 | NA | NA | NA | NA | 0 | 0 | 4.44e+02 | 8.80e+00 | NA | NA | NA | NA | 0 | 0 | 3.80e+01 | 5.29e+00 | NA | NA | NA | NA | 0 | 0 | 3.30e+01 | 5.09e+00 | NA | NA | NA | NA | 0 | 0 | 3.93e+02 | 8.62e+00 | 4.44e+02 | 8.80e+00 | 3.80e+01 | 5.29e+00 | 3.30e+01 | 5.09e+00 | | chr9 | 131486740 | 131495522 | uc031tfi.1 | 0.5383 | + | LOC100506100 | antisense | 1.89e-02 | 2.43e-11 | 1.46e-02 | 1.89e-05 | 2.14e-03 | 0.1039 | -3.266370 | 0.0798 | -3.648288 | 4.33e+02 | 8.76e+00 | NA | NA | NA | NA | 0 | 0 | 4.89e+02 | 8.94e+00 | NA | NA | NA | NA | 0 | 0 | 4.50e+01 | 5.52e+00 | NA | NA | NA | NA | 0 | 0 | 3.90e+01 | 5.32e+00 | NA | NA | NA | NA | 0 | 0 | 4.33e+02 | 8.76e+00 | 4.89e+02 | 8.94e+00 | 4.50e+01 | 5.52e+00 | 3.90e+01 | 5.32e+00 | | chr5 | 172195092 | 172198203 | uc003mbv.2 | 0.5302 | - | DUSP1 | protein_coding | 1.43e-03 | 2.62e-08 | 2.34e-04 | 2.06e-05 | 2.31e-03 | 5.3319 | 2.414645 | 4.1118 | 2.039754 | 9.19e+02 | 9.85e+00 | NA | NA | NA | NA | 0 | 0 | 1.04e+03 | 1.00e+01 | NA | NA | NA | NA | 0 | 0 | 4.90e+03 | 1.23e+01 | NA | NA | NA | NA | 0 | 0 | 4.27e+03 | 1.21e+01 | NA | NA | NA | NA | 0 | 0 | 9.19e+02 | 9.85e+00 | 1.04e+03 | 1.00e+01 | 4.90e+03 | 1.23e+01 | 4.27e+03 | 1.21e+01 | | chr14 | 75408532 | 75422467 | uc001xqz.3 | 0.5614 | - | PGF | protein_coding | 2.12e-03 | 4.83e-09 | 9.14e-04 | 2.11e-05 | 2.33e-03 | 0.1667 | -2.584963 | 0.1285 | -2.959984 | 2.27e+03 | 1.11e+01 | NA | NA | NA | NA | 0 | 0 | 2.56e+03 | 1.13e+01 | NA | NA | NA | NA | 0 | 0 | 3.78e+02 | 8.57e+00 | NA | NA | NA | NA | 0 | 0 | 3.29e+02 | 8.37e+00 | NA | NA | NA | NA | 0 | 0 | 2.27e+03 | 1.11e+01 | 2.56e+03 | 1.13e+01 | 3.78e+02 | 8.57e+00 | 3.29e+02 | 8.37e+00 | | chr22 | 24615621 | 24641110 | uc002zzp.4 | 0.5206 | - | GGT5 | protein_coding | 2.86e-03 | 1.88e-09 | 1.87e-03 | 2.16e-05 | 2.36e-03 | 0.1560 | -2.680721 | 0.1203 | -3.055771 | 1.64e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 1.85e+03 | 1.09e+01 | NA | NA | NA | NA | 0 | 0 | 2.55e+02 | 8.00e+00 | NA | NA | NA | NA | 0 | 0 | 2.22e+02 | 7.80e+00 | NA | NA | NA | NA | 0 | 0 | 1.64e+03 | 1.07e+01 | 1.85e+03 | 1.09e+01 | 2.55e+02 | 8.00e+00 | 2.22e+02 | 7.80e+00 | | chr1 | 155165378 | 155177772 | uc001fix.3 | 0.5468 | - | THBS3 | protein_coding | 1.29e-02 | 8.66e-11 | 1.00e-02 | 2.24e-05 | 2.39e-03 | 0.1187 | -3.074928 | 0.0912 | -3.454979 | 5.73e+02 | 9.16e+00 | NA | NA | NA | NA | 0 | 0 | 6.47e+02 | 9.34e+00 | NA | NA | NA | NA | 0 | 0 | 6.80e+01 | 6.11e+00 | NA | NA | NA | NA | 0 | 0 | 5.90e+01 | 5.91e+00 | NA | NA | NA | NA | 0 | 0 | 5.73e+02 | 9.16e+00 | 6.47e+02 | 9.34e+00 | 6.80e+01 | 6.11e+00 | 5.90e+01 | 5.91e+00 | | chr15 | 74218788 | 74244478 | uc002awc.1 | 0.5488 | + | LOXL1 | protein_coding | 4.41e-03 | 7.37e-10 | 3.44e-03 | 2.24e-05 | 2.39e-03 | 0.1455 | -2.780434 | 0.1122 | -3.155775 | 1.17e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 1.32e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.70e+02 | 7.42e+00 | NA | NA | NA | NA | 0 | 0 | 1.48e+02 | 7.22e+00 | NA | NA | NA | NA | 0 | 0 | 1.17e+03 | 1.02e+01 | 1.32e+03 | 1.04e+01 | 1.70e+02 | 7.42e+00 | 1.48e+02 | 7.22e+00 | | chrX | 150151762 | 150159248 | uc004fep.3 | 0.5030 | + | HMGB3 | protein_coding | 1.66e-03 | 2.24e-08 | 3.48e-04 | 2.35e-05 | 2.48e-03 | 0.1845 | -2.438418 | 0.1424 | -2.811928 | 3.92e+03 | 1.19e+01 | NA | NA | NA | NA | 0 | 0 | 4.42e+03 | 1.21e+01 | NA | NA | NA | NA | 0 | 0 | 7.23e+02 | 9.50e+00 | NA | NA | NA | NA | 0 | 0 | 6.30e+02 | 9.30e+00 | NA | NA | NA | NA | 0 | 0 | 3.92e+03 | 1.19e+01 | 4.42e+03 | 1.21e+01 | 7.23e+02 | 9.50e+00 | 6.30e+02 | 9.30e+00 | | chr18 | 6941742 | 7117813 | uc002knm.3 | 0.4314 | - | LAMA1 | protein_coding | 2.49e-02 | 3.27e-11 | 1.71e-02 | 2.41e-05 | 2.52e-03 | 9.5122 | 3.249778 | 7.3913 | 2.885829 | 4.10e+01 | 5.39e+00 | NA | NA | NA | NA | 0 | 0 | 4.60e+01 | 5.55e+00 | NA | NA | NA | NA | 0 | 0 | 3.90e+02 | 8.61e+00 | NA | NA | NA | NA | 0 | 0 | 3.40e+02 | 8.41e+00 | NA | NA | NA | NA | 0 | 0 | 4.10e+01 | 5.39e+00 | 4.60e+01 | 5.55e+00 | 3.90e+02 | 8.61e+00 | 3.40e+02 | 8.41e+00 | | chr11 | 1244294 | 1283406 | uc001lta.3 | 0.6556 | + | MUC5B | protein_coding | 1.38e-02 | 1.13e-10 | 1.02e-02 | 2.52e-05 | 2.61e-03 | 0.1204 | -3.054644 | 0.0925 | -3.434770 | 5.65e+02 | 9.14e+00 | NA | NA | NA | NA | 0 | 0 | 6.38e+02 | 9.32e+00 | NA | NA | NA | NA | 0 | 0 | 6.80e+01 | 6.11e+00 | NA | NA | NA | NA | 0 | 0 | 5.90e+01 | 5.91e+00 | NA | NA | NA | NA | 0 | 0 | 5.65e+02 | 9.14e+00 | 6.38e+02 | 9.32e+00 | 6.80e+01 | 6.11e+00 | 5.90e+01 | 5.91e+00 | | chr10 | 124221040 | 124274424 | uc001lgj.2 | 0.4920 | + | HTRA1 | protein_coding | 2.59e-03 | 7.75e-09 | 9.82e-04 | 2.70e-05 | 2.77e-03 | 0.1711 | -2.546977 | 0.1320 | -2.921070 | 2.17e+03 | 1.11e+01 | NA | NA | NA | NA | 0 | 0 | 2.45e+03 | 1.13e+01 | NA | NA | NA | NA | 0 | 0 | 3.72e+02 | 8.54e+00 | NA | NA | NA | NA | 0 | 0 | 3.24e+02 | 8.34e+00 | NA | NA | NA | NA | 0 | 0 | 2.17e+03 | 1.11e+01 | 2.45e+03 | 1.13e+01 | 3.72e+02 | 8.54e+00 | 3.24e+02 | 8.34e+00 | | chr21 | 43731776 | 43735706 | uc002zav.3 | 0.5434 | - | TFF3 | protein_coding | 6.92e-03 | 5.87e-10 | 5.23e-03 | 2.77e-05 | 2.81e-03 | 0.1402 | -2.834683 | 0.1085 | -3.204175 | 9.06e+02 | 9.82e+00 | NA | NA | NA | NA | 0 | 0 | 1.02e+03 | 1.00e+01 | NA | NA | NA | NA | 0 | 0 | 1.27e+02 | 7.00e+00 | NA | NA | NA | NA | 0 | 0 | 1.11e+02 | 6.81e+00 | NA | NA | NA | NA | 0 | 0 | 9.06e+02 | 9.82e+00 | 1.02e+03 | 1.00e+01 | 1.27e+02 | 7.00e+00 | 1.11e+02 | 6.81e+00 | | chrX | 10124984 | 10205699 | uc004csy.4 | 0.4524 | + | CLCN4 | protein_coding | 7.47e-03 | 6.78e-10 | 5.28e-03 | 2.99e-05 | 3.00e-03 | 6.9922 | 2.805756 | 5.3836 | 2.428561 | 1.29e+02 | 7.02e+00 | NA | NA | NA | NA | 0 | 0 | 1.46e+02 | 7.20e+00 | NA | NA | NA | NA | 0 | 0 | 9.02e+02 | 9.82e+00 | NA | NA | NA | NA | 0 | 0 | 7.86e+02 | 9.62e+00 | NA | NA | NA | NA | 0 | 0 | 1.29e+02 | 7.02e+00 | 1.46e+02 | 7.20e+00 | 9.02e+02 | 9.82e+00 | 7.86e+02 | 9.62e+00 | | chr12 | 13043955 | 13066600 | uc001rba.3 | 0.4660 | + | GPRC5A | protein_coding | 2.47e-03 | 1.69e-08 | 6.91e-04 | 3.07e-05 | 3.04e-03 | 5.5322 | 2.467860 | 4.2689 | 2.093856 | 4.81e+02 | 8.91e+00 | NA | NA | NA | NA | 0 | 0 | 5.43e+02 | 9.09e+00 | NA | NA | NA | NA | 0 | 0 | 2.66e+03 | 1.14e+01 | NA | NA | NA | NA | 0 | 0 | 2.32e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 4.81e+02 | 8.91e+00 | 5.43e+02 | 9.09e+00 | 2.66e+03 | 1.14e+01 | 2.32e+03 | 1.12e+01 | | chr9 | 140201347 | 140317714 | uc004cmp.2 | 0.5701 | - | EXD3 | protein_coding | 4.15e-02 | 3.50e-11 | 2.73e-02 | 3.41e-05 | 3.35e-03 | 0.0899 | -3.475085 | 0.0701 | -3.835189 | 2.78e+02 | 8.12e+00 | NA | NA | NA | NA | 0 | 0 | 3.14e+02 | 8.30e+00 | NA | NA | NA | NA | 0 | 0 | 2.50e+01 | 4.70e+00 | NA | NA | NA | NA | 0 | 0 | 2.20e+01 | 4.52e+00 | NA | NA | NA | NA | 0 | 0 | 2.78e+02 | 8.12e+00 | 3.14e+02 | 8.30e+00 | 2.50e+01 | 4.70e+00 | 2.20e+01 | 4.52e+00 | | chr9 | 39072763 | 39288300 | uc004abi.3 | 0.3824 | - | CNTNAP3 | protein_coding | 9.67e-03 | 1.21e-09 | 6.17e-03 | 4.16e-05 | 4.04e-03 | 0.1449 | -2.786421 | 0.1122 | -3.155986 | 8.21e+02 | 9.68e+00 | NA | NA | NA | NA | 0 | 0 | 9.27e+02 | 9.86e+00 | NA | NA | NA | NA | 0 | 0 | 1.19e+02 | 6.91e+00 | NA | NA | NA | NA | 0 | 0 | 1.04e+02 | 6.71e+00 | NA | NA | NA | NA | 0 | 0 | 8.21e+02 | 9.68e+00 | 9.27e+02 | 9.86e+00 | 1.19e+02 | 6.91e+00 | 1.04e+02 | 6.71e+00 | | chrX | 153029650 | 153045940 | uc010nuk.2 | 0.6572 | + | PLXNB3 | protein_coding | 3.14e-03 | 2.86e-08 | 8.31e-04 | 4.21e-05 | 4.04e-03 | 0.1850 | -2.434021 | 0.1430 | -2.806311 | 2.45e+03 | 1.13e+01 | NA | NA | NA | NA | 0 | 0 | 2.76e+03 | 1.14e+01 | NA | NA | NA | NA | 0 | 0 | 4.53e+02 | 8.83e+00 | NA | NA | NA | NA | 0 | 0 | 3.95e+02 | 8.63e+00 | NA | NA | NA | NA | 0 | 0 | 2.45e+03 | 1.13e+01 | 2.76e+03 | 1.14e+01 | 4.53e+02 | 8.83e+00 | 3.95e+02 | 8.63e+00 | | chr7 | 140218219 | 140302342 | uc010lnj.3 | 0.4741 | - | DENND2A | protein_coding | 1.43e-02 | 6.02e-10 | 8.92e-03 | 4.25e-05 | 4.04e-03 | 0.1354 | -2.884348 | 0.1046 | -3.257011 | 6.35e+02 | 9.31e+00 | NA | NA | NA | NA | 0 | 0 | 7.17e+02 | 9.49e+00 | NA | NA | NA | NA | 0 | 0 | 8.60e+01 | 6.44e+00 | NA | NA | NA | NA | 0 | 0 | 7.50e+01 | 6.25e+00 | NA | NA | NA | NA | 0 | 0 | 6.35e+02 | 9.31e+00 | 7.17e+02 | 9.49e+00 | 8.60e+01 | 6.44e+00 | 7.50e+01 | 6.25e+00 | | chrX | 12993225 | 12995346 | uc004cvf.3 | 0.5052 | + | TMSB4X | protein_coding | 1.76e-03 | 5.37e-07 | 8.31e-05 | 4.28e-05 | 4.04e-03 | 0.2262 | -2.144033 | 0.1746 | -2.518088 | 5.67e+04 | 1.58e+01 | NA | NA | NA | NA | 0 | 0 | 6.41e+04 | 1.60e+01 | NA | NA | NA | NA | 0 | 0 | 1.28e+04 | 1.36e+01 | NA | NA | NA | NA | 0 | 0 | 1.12e+04 | 1.34e+01 | NA | NA | NA | NA | 0 | 0 | 5.67e+04 | 1.58e+01 | 6.41e+04 | 1.60e+01 | 1.28e+04 | 1.36e+01 | 1.12e+04 | 1.34e+01 | | chr2 | 33172368 | 33624575 | uc021vft.1 | 0.4023 | + | LTBP1 | protein_coding | 2.31e-03 | 1.90e-07 | 1.87e-04 | 4.35e-05 | 4.06e-03 | 0.2111 | -2.244302 | 0.1629 | -2.618006 | 6.26e+03 | 1.26e+01 | NA | NA | NA | NA | 0 | 0 | 7.07e+03 | 1.28e+01 | NA | NA | NA | NA | 0 | 0 | 1.32e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.15e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 6.26e+03 | 1.26e+01 | 7.07e+03 | 1.28e+01 | 1.32e+03 | 1.04e+01 | 1.15e+03 | 1.02e+01 | | chr11 | 18417812 | 18429765 | uc010rdd.2 | 0.4182 | + | LDHA | protein_coding | 1.79e-03 | 5.76e-07 | 8.31e-05 | 4.41e-05 | 4.08e-03 | 0.2272 | -2.137801 | 0.1753 | -2.511768 | 6.50e+04 | 1.60e+01 | NA | NA | NA | NA | 0 | 0 | 7.34e+04 | 1.62e+01 | NA | NA | NA | NA | 0 | 0 | 1.48e+04 | 1.39e+01 | NA | NA | NA | NA | 0 | 0 | 1.29e+04 | 1.37e+01 | NA | NA | NA | NA | 0 | 0 | 6.50e+04 | 1.60e+01 | 7.34e+04 | 1.62e+01 | 1.48e+04 | 1.39e+01 | 1.29e+04 | 1.37e+01 | | chr11 | 61664767 | 61685081 | uc001nso.4 | 0.5944 | - | RAB3IL1 | protein_coding | 4.86e-02 | 6.66e-11 | 2.76e-02 | 4.47e-05 | 4.10e-03 | 9.9643 | 3.316766 | 7.5938 | 2.924813 | 2.80e+01 | 4.86e+00 | NA | NA | NA | NA | 0 | 0 | 3.20e+01 | 5.04e+00 | NA | NA | NA | NA | 0 | 0 | 2.79e+02 | 8.13e+00 | NA | NA | NA | NA | 0 | 0 | 2.43e+02 | 7.93e+00 | NA | NA | NA | NA | 0 | 0 | 2.80e+01 | 4.86e+00 | 3.20e+01 | 5.04e+00 | 2.79e+02 | 8.13e+00 | 2.43e+02 | 7.93e+00 | | chr4 | 139936942 | 139967095 | uc003ihl.3 | 0.4481 | + | NOCT | protein_coding | 9.11e-03 | 2.06e-09 | 5.31e-03 | 4.64e-05 | 4.21e-03 | 6.5468 | 2.710782 | 5.0510 | 2.336556 | 1.39e+02 | 7.13e+00 | NA | NA | NA | NA | 0 | 0 | 1.57e+02 | 7.30e+00 | NA | NA | NA | NA | 0 | 0 | 9.10e+02 | 9.83e+00 | NA | NA | NA | NA | 0 | 0 | 7.93e+02 | 9.63e+00 | NA | NA | NA | NA | 0 | 0 | 1.39e+02 | 7.13e+00 | 1.57e+02 | 7.30e+00 | 9.10e+02 | 9.83e+00 | 7.93e+02 | 9.63e+00 | | chr6 | 42068856 | 42110715 | uc003orw.2 | 0.5264 | - | C6orf132 | protein_coding | 9.05e-03 | 2.29e-09 | 5.22e-03 | 4.77e-05 | 4.29e-03 | 6.5000 | 2.700440 | 5.0250 | 2.329124 | 1.42e+02 | 7.16e+00 | NA | NA | NA | NA | 0 | 0 | 1.60e+02 | 7.33e+00 | NA | NA | NA | NA | 0 | 0 | 9.23e+02 | 9.85e+00 | NA | NA | NA | NA | 0 | 0 | 8.04e+02 | 9.65e+00 | NA | NA | NA | NA | 0 | 0 | 1.42e+02 | 7.16e+00 | 1.60e+02 | 7.33e+00 | 9.23e+02 | 9.85e+00 | 8.04e+02 | 9.65e+00 | | chr7 | 129932973 | 129964020 | uc003vpr.3 | 0.4673 | + | CPA4 | protein_coding | 4.35e-03 | 1.95e-08 | 1.49e-03 | 5.02e-05 | 4.40e-03 | 5.5343 | 2.468408 | 4.2725 | 2.095076 | 3.35e+02 | 8.39e+00 | NA | NA | NA | NA | 0 | 0 | 3.78e+02 | 8.57e+00 | NA | NA | NA | NA | 0 | 0 | 1.85e+03 | 1.09e+01 | NA | NA | NA | NA | 0 | 0 | 1.62e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 3.35e+02 | 8.39e+00 | 3.78e+02 | 8.57e+00 | 1.85e+03 | 1.09e+01 | 1.62e+03 | 1.07e+01 | | chr7 | 16832263 | 16844738 | uc003str.3 | 0.3969 | - | AGR2 | protein_coding | 2.65e-03 | 1.83e-07 | 2.65e-04 | 5.04e-05 | 4.40e-03 | 0.2103 | -2.249476 | 0.1623 | -2.623619 | 5.13e+03 | 1.23e+01 | NA | NA | NA | NA | 0 | 0 | 5.79e+03 | 1.25e+01 | NA | NA | NA | NA | 0 | 0 | 1.08e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 9.39e+02 | 9.88e+00 | NA | NA | NA | NA | 0 | 0 | 5.13e+03 | 1.23e+01 | 5.79e+03 | 1.25e+01 | 1.08e+03 | 1.01e+01 | 9.39e+02 | 9.88e+00 | | chr19 | 48958963 | 48969367 | uc002pje.2 | 0.5220 | + | KCNJ14 | protein_coding | 2.72e-02 | 3.15e-10 | 1.50e-02 | 5.05e-05 | 4.40e-03 | 8.0556 | 3.009984 | 6.2131 | 2.635317 | 5.40e+01 | 5.78e+00 | NA | NA | NA | NA | 0 | 0 | 6.10e+01 | 5.95e+00 | NA | NA | NA | NA | 0 | 0 | 4.35e+02 | 8.77e+00 | NA | NA | NA | NA | 0 | 0 | 3.79e+02 | 8.57e+00 | NA | NA | NA | NA | 0 | 0 | 5.40e+01 | 5.78e+00 | 6.10e+01 | 5.95e+00 | 4.35e+02 | 8.77e+00 | 3.79e+02 | 8.57e+00 | | chr11 | 405715 | 417397 | uc001lpe.1 | 0.6513 | - | SIGIRR | protein_coding | 3.26e-02 | 2.21e-10 | 1.81e-02 | 5.07e-05 | 4.40e-03 | 0.1164 | -3.102811 | 0.0890 | -3.490165 | 3.78e+02 | 8.57e+00 | NA | NA | NA | NA | 0 | 0 | 4.27e+02 | 8.74e+00 | NA | NA | NA | NA | 0 | 0 | 4.40e+01 | 5.49e+00 | NA | NA | NA | NA | 0 | 0 | 3.80e+01 | 5.29e+00 | NA | NA | NA | NA | 0 | 0 | 3.78e+02 | 8.57e+00 | 4.27e+02 | 8.74e+00 | 4.40e+01 | 5.49e+00 | 3.80e+01 | 5.29e+00 | | chr2 | 235401685 | 235405693 | uc002vvn.3 | 0.5016 | - | ARL4C | protein_coding | 3.06e-03 | 1.05e-07 | 4.83e-04 | 5.37e-05 | 4.62e-03 | 0.2019 | -2.308064 | 0.1557 | -2.682944 | 3.52e+03 | 1.18e+01 | NA | NA | NA | NA | 0 | 0 | 3.98e+03 | 1.20e+01 | NA | NA | NA | NA | 0 | 0 | 7.11e+02 | 9.48e+00 | NA | NA | NA | NA | 0 | 0 | 6.19e+02 | 9.28e+00 | NA | NA | NA | NA | 0 | 0 | 3.52e+03 | 1.18e+01 | 3.98e+03 | 1.20e+01 | 7.11e+02 | 9.48e+00 | 6.19e+02 | 9.28e+00 | | chr1 | 179068461 | 179112224 | uc001gmi.4 | 0.4352 | - | ABL2 | protein_coding | 2.74e-03 | 3.30e-07 | 1.77e-04 | 5.42e-05 | 4.62e-03 | 4.5752 | 2.193838 | 3.5305 | 1.819888 | 1.44e+03 | 1.05e+01 | NA | NA | NA | NA | 0 | 0 | 1.62e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 6.57e+03 | 1.27e+01 | NA | NA | NA | NA | 0 | 0 | 5.72e+03 | 1.25e+01 | NA | NA | NA | NA | 0 | 0 | 1.44e+03 | 1.05e+01 | 1.62e+03 | 1.07e+01 | 6.57e+03 | 1.27e+01 | 5.72e+03 | 1.25e+01 | | chr1 | 26210676 | 26232993 | uc010oev.2 | 0.4776 | - | STMN1 | processed_transcript | 2.53e-03 | 9.01e-07 | 8.31e-05 | 5.74e-05 | 4.85e-03 | 0.2333 | -2.099649 | 0.1801 | -2.473514 | 2.01e+04 | 1.43e+01 | NA | NA | NA | NA | 0 | 0 | 2.26e+04 | 1.45e+01 | NA | NA | NA | NA | 0 | 0 | 4.68e+03 | 1.22e+01 | NA | NA | NA | NA | 0 | 0 | 4.08e+03 | 1.20e+01 | NA | NA | NA | NA | 0 | 0 | 2.01e+04 | 1.43e+01 | 2.26e+04 | 1.45e+01 | 4.68e+03 | 1.22e+01 | 4.08e+03 | 1.20e+01 | | chr1 | 89401455 | 89458643 | uc001dmp.2 | 0.3860 | - | KYAT3 | protein_coding | 1.16e-02 | 3.17e-09 | 6.17e-03 | 6.10e-05 | 5.11e-03 | 0.1550 | -2.689212 | 0.1193 | -3.067626 | 8.32e+02 | 9.70e+00 | NA | NA | NA | NA | 0 | 0 | 9.39e+02 | 9.88e+00 | NA | NA | NA | NA | 0 | 0 | 1.29e+02 | 7.02e+00 | NA | NA | NA | NA | 0 | 0 | 1.12e+02 | 6.82e+00 | NA | NA | NA | NA | 0 | 0 | 8.32e+02 | 9.70e+00 | 9.39e+02 | 9.88e+00 | 1.29e+02 | 7.02e+00 | 1.12e+02 | 6.82e+00 | | chr17 | 40932648 | 40949084 | uc002ibj.3 | 0.5393 | + | WNK4 | protein_coding | 6.42e-03 | 1.41e-08 | 2.67e-03 | 6.22e-05 | 5.17e-03 | 5.7037 | 2.511899 | 4.4051 | 2.139178 | 2.43e+02 | 7.93e+00 | NA | NA | NA | NA | 0 | 0 | 2.74e+02 | 8.10e+00 | NA | NA | NA | NA | 0 | 0 | 1.39e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.21e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 2.43e+02 | 7.93e+00 | 2.74e+02 | 8.10e+00 | 1.39e+03 | 1.04e+01 | 1.21e+03 | 1.02e+01 | | chr3 | 52847005 | 52864717 | uc003dfz.3 | 0.5569 | - | ITIH4 | protein_coding | 2.33e-02 | 8.69e-10 | 1.23e-02 | 6.29e-05 | 5.17e-03 | 0.1344 | -2.895531 | 0.1033 | -3.274704 | 5.06e+02 | 8.99e+00 | NA | NA | NA | NA | 0 | 0 | 5.71e+02 | 9.16e+00 | NA | NA | NA | NA | 0 | 0 | 6.80e+01 | 6.11e+00 | NA | NA | NA | NA | 0 | 0 | 5.90e+01 | 5.91e+00 | NA | NA | NA | NA | 0 | 0 | 5.06e+02 | 8.99e+00 | 5.71e+02 | 9.16e+00 | 6.80e+01 | 6.11e+00 | 5.90e+01 | 5.91e+00 | | chr19 | 17434031 | 17445638 | uc002ngf.2 | 0.6267 | - | ANO8 | protein_coding | 5.65e-03 | 2.18e-08 | 2.09e-03 | 6.36e-05 | 5.19e-03 | 0.1803 | -2.471306 | 0.1390 | -2.846548 | 1.59e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 1.79e+03 | 1.08e+01 | NA | NA | NA | NA | 0 | 0 | 2.86e+02 | 8.16e+00 | NA | NA | NA | NA | 0 | 0 | 2.49e+02 | 7.97e+00 | NA | NA | NA | NA | 0 | 0 | 1.59e+03 | 1.06e+01 | 1.79e+03 | 1.08e+01 | 2.86e+02 | 8.16e+00 | 2.49e+02 | 7.97e+00 | | chr7 | 192968 | 300740 | uc003sip.3 | 0.3226 | + | FAM20C | protein_coding | 4.12e-03 | 1.04e-07 | 7.22e-04 | 6.76e-05 | 5.47e-03 | 0.2006 | -2.317623 | 0.1549 | -2.690923 | 2.68e+03 | 1.14e+01 | NA | NA | NA | NA | 0 | 0 | 3.02e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 5.37e+02 | 9.07e+00 | NA | NA | NA | NA | 0 | 0 | 4.68e+02 | 8.87e+00 | NA | NA | NA | NA | 0 | 0 | 2.68e+03 | 1.14e+01 | 3.02e+03 | 1.16e+01 | 5.37e+02 | 9.07e+00 | 4.68e+02 | 8.87e+00 | | chr16 | 2653384 | 2680495 | uc002cqy.3 | 0.5422 | + | LOC652276 | processed_transcript | 1.43e-02 | 2.99e-09 | 7.45e-03 | 6.84e-05 | 5.49e-03 | 6.5625 | 2.714246 | 5.0394 | 2.333243 | 1.12e+02 | 6.82e+00 | NA | NA | NA | NA | 0 | 0 | 1.27e+02 | 7.00e+00 | NA | NA | NA | NA | 0 | 0 | 7.35e+02 | 9.52e+00 | NA | NA | NA | NA | 0 | 0 | 6.40e+02 | 9.32e+00 | NA | NA | NA | NA | 0 | 0 | 1.12e+02 | 6.82e+00 | 1.27e+02 | 7.00e+00 | 7.35e+02 | 9.52e+00 | 6.40e+02 | 9.32e+00 | | chr1 | 169433148 | 169455208 | uc001gge.4 | 0.3868 | - | SLC19A2 | protein_coding | 2.05e-02 | 1.73e-09 | 1.01e-02 | 7.10e-05 | 5.65e-03 | 6.8488 | 2.775859 | 5.2887 | 2.402902 | 8.60e+01 | 6.44e+00 | NA | NA | NA | NA | 0 | 0 | 9.70e+01 | 6.61e+00 | NA | NA | NA | NA | 0 | 0 | 5.89e+02 | 9.20e+00 | NA | NA | NA | NA | 0 | 0 | 5.13e+02 | 9.01e+00 | NA | NA | NA | NA | 0 | 0 | 8.60e+01 | 6.44e+00 | 9.70e+01 | 6.61e+00 | 5.89e+02 | 9.20e+00 | 5.13e+02 | 9.01e+00 | | chr1 | 17300998 | 17307173 | uc001azw.3 | 0.6231 | - | MFAP2 | protein_coding | 6.48e-03 | 2.83e-08 | 2.31e-03 | 7.51e-05 | 5.93e-03 | 0.1828 | -2.451360 | 0.1409 | -2.826891 | 1.52e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 1.71e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 2.77e+02 | 8.12e+00 | NA | NA | NA | NA | 0 | 0 | 2.41e+02 | 7.92e+00 | NA | NA | NA | NA | 0 | 0 | 1.52e+03 | 1.06e+01 | 1.71e+03 | 1.07e+01 | 2.77e+02 | 8.12e+00 | 2.41e+02 | 7.92e+00 | | chr17 | 72744750 | 72765499 | uc002jlo.4 | 0.5624 | + | SLC9A3R1 | protein_coding | 3.57e-03 | 9.68e-07 | 1.30e-04 | 7.66e-05 | 5.99e-03 | 0.2337 | -2.097108 | 0.1804 | -2.470935 | 8.14e+03 | 1.30e+01 | NA | NA | NA | NA | 0 | 0 | 9.19e+03 | 1.32e+01 | NA | NA | NA | NA | 0 | 0 | 1.90e+03 | 1.09e+01 | NA | NA | NA | NA | 0 | 0 | 1.66e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 8.14e+03 | 1.30e+01 | 9.19e+03 | 1.32e+01 | 1.90e+03 | 1.09e+01 | 1.66e+03 | 1.07e+01 | | chr12 | 109015679 | 109025854 | uc010sxe.2 | 0.5214 | - | SELPLG | protein_coding | 4.03e-02 | 6.14e-10 | 1.93e-02 | 7.81e-05 | 6.06e-03 | 7.9565 | 2.992138 | 6.1346 | 2.616973 | 4.60e+01 | 5.55e+00 | NA | NA | NA | NA | 0 | 0 | 5.20e+01 | 5.73e+00 | NA | NA | NA | NA | 0 | 0 | 3.66e+02 | 8.52e+00 | NA | NA | NA | NA | 0 | 0 | 3.19e+02 | 8.32e+00 | NA | NA | NA | NA | 0 | 0 | 4.60e+01 | 5.55e+00 | 5.20e+01 | 5.73e+00 | 3.66e+02 | 8.52e+00 | 3.19e+02 | 8.32e+00 | | chr7 | 18535884 | 19036992 | uc003sui.3 | 0.3600 | + | HDAC9 | protein_coding | 1.22e-02 | 8.98e-09 | 5.50e-03 | 8.46e-05 | 6.51e-03 | 6.0000 | 2.584963 | 4.6140 | 2.206029 | 1.51e+02 | 7.25e+00 | NA | NA | NA | NA | 0 | 0 | 1.71e+02 | 7.43e+00 | NA | NA | NA | NA | 0 | 0 | 9.06e+02 | 9.82e+00 | NA | NA | NA | NA | 0 | 0 | 7.89e+02 | 9.63e+00 | NA | NA | NA | NA | 0 | 0 | 1.51e+02 | 7.25e+00 | 1.71e+02 | 7.43e+00 | 9.06e+02 | 9.82e+00 | 7.89e+02 | 9.63e+00 | | chr20 | 34995447 | 35157040 | uc010zvp.2 | 0.5043 | + | DLGAP4 | protein_coding | 3.91e-03 | 9.17e-07 | 1.82e-04 | 8.67e-05 | 6.59e-03 | 4.2952 | 2.102718 | 3.3132 | 1.728230 | 1.56e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 1.76e+03 | 1.08e+01 | NA | NA | NA | NA | 0 | 0 | 6.68e+03 | 1.27e+01 | NA | NA | NA | NA | 0 | 0 | 5.82e+03 | 1.25e+01 | NA | NA | NA | NA | 0 | 0 | 1.56e+03 | 1.06e+01 | 1.76e+03 | 1.08e+01 | 6.68e+03 | 1.27e+01 | 5.82e+03 | 1.25e+01 | | chr1 | 32697260 | 32707311 | uc001buv.4 | 0.5266 | - | MTMR9LP | processed_transcript | 3.74e-02 | 1.03e-09 | 1.77e-02 | 8.80e-05 | 6.59e-03 | 0.1301 | -2.942285 | 0.0993 | -3.331731 | 3.92e+02 | 8.62e+00 | NA | NA | NA | NA | 0 | 0 | 4.43e+02 | 8.79e+00 | NA | NA | NA | NA | 0 | 0 | 5.10e+01 | 5.70e+00 | NA | NA | NA | NA | 0 | 0 | 4.40e+01 | 5.49e+00 | NA | NA | NA | NA | 0 | 0 | 3.92e+02 | 8.62e+00 | 4.43e+02 | 8.79e+00 | 5.10e+01 | 5.70e+00 | 4.40e+01 | 5.49e+00 | | chr2 | 233243347 | 233247599 | uc002vsq.3 | 0.6219 | + | ALPP | protein_coding | 1.56e-02 | 6.12e-09 | 7.20e-03 | 8.83e-05 | 6.59e-03 | 0.1601 | -2.643379 | 0.1231 | -3.022156 | 7.56e+02 | 9.56e+00 | NA | NA | NA | NA | 0 | 0 | 8.53e+02 | 9.74e+00 | NA | NA | NA | NA | 0 | 0 | 1.21e+02 | 6.93e+00 | NA | NA | NA | NA | 0 | 0 | 1.05e+02 | 6.73e+00 | NA | NA | NA | NA | 0 | 0 | 7.56e+02 | 9.56e+00 | 8.53e+02 | 9.74e+00 | 1.21e+02 | 6.93e+00 | 1.05e+02 | 6.73e+00 | | chr8 | 23154409 | 23261722 | uc003xdh.1 | 0.4879 | - | LOXL2 | protein_coding | 4.07e-03 | 1.93e-06 | 8.83e-05 | 8.85e-05 | 6.59e-03 | 0.2445 | -2.032301 | 0.1887 | -2.406063 | 1.09e+04 | 1.34e+01 | NA | NA | NA | NA | 0 | 0 | 1.23e+04 | 1.36e+01 | NA | NA | NA | NA | 0 | 0 | 2.67e+03 | 1.14e+01 | NA | NA | NA | NA | 0 | 0 | 2.33e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 1.09e+04 | 1.34e+01 | 1.23e+04 | 1.36e+01 | 2.67e+03 | 1.14e+01 | 2.33e+03 | 1.12e+01 | | chr6 | 132129155 | 132216295 | uc011ecf.2 | 0.3819 | + | ENPP1 | protein_coding | 4.11e-03 | 1.50e-06 | 1.14e-04 | 8.90e-05 | 6.59e-03 | 0.2405 | -2.056165 | 0.1855 | -2.430537 | 8.54e+03 | 1.31e+01 | NA | NA | NA | NA | 0 | 0 | 9.64e+03 | 1.32e+01 | NA | NA | NA | NA | 0 | 0 | 2.05e+03 | 1.10e+01 | NA | NA | NA | NA | 0 | 0 | 1.79e+03 | 1.08e+01 | NA | NA | NA | NA | 0 | 0 | 8.54e+03 | 1.31e+01 | 9.64e+03 | 1.32e+01 | 2.05e+03 | 1.10e+01 | 1.79e+03 | 1.08e+01 | | chr5 | 149980641 | 150031903 | uc003lsn.3 | 0.5234 | + | SYNPO | protein_coding | 1.19e-02 | 1.22e-08 | 5.15e-03 | 9.08e-05 | 6.67e-03 | 5.8765 | 2.554968 | 4.5301 | 2.179528 | 1.62e+02 | 7.35e+00 | NA | NA | NA | NA | 0 | 0 | 1.83e+02 | 7.52e+00 | NA | NA | NA | NA | 0 | 0 | 9.52e+02 | 9.90e+00 | NA | NA | NA | NA | 0 | 0 | 8.29e+02 | 9.70e+00 | NA | NA | NA | NA | 0 | 0 | 1.62e+02 | 7.35e+00 | 1.83e+02 | 7.52e+00 | 9.52e+02 | 9.90e+00 | 8.29e+02 | 9.70e+00 | | chr8 | 128748314 | 128753680 | uc003ysi.3 | 0.5353 | + | MYC | protein_coding | 4.27e-03 | 1.36e-06 | 1.61e-04 | 9.78e-05 | 7.14e-03 | 4.1864 | 2.065698 | 3.2300 | 1.691532 | 1.76e+03 | 1.08e+01 | NA | NA | NA | NA | 0 | 0 | 1.99e+03 | 1.10e+01 | NA | NA | NA | NA | 0 | 0 | 7.37e+03 | 1.28e+01 | NA | NA | NA | NA | 0 | 0 | 6.42e+03 | 1.26e+01 | NA | NA | NA | NA | 0 | 0 | 1.76e+03 | 1.08e+01 | 1.99e+03 | 1.10e+01 | 7.37e+03 | 1.28e+01 | 6.42e+03 | 1.26e+01 | | chr11 | 61595712 | 61634825 | uc001nsl.1 | 0.5273 | + | FADS2 | protein_coding | 4.24e-03 | 2.74e-06 | 8.31e-05 | 9.88e-05 | 7.15e-03 | 0.2503 | -1.998245 | 0.1932 | -2.372131 | 1.48e+04 | 1.39e+01 | NA | NA | NA | NA | 0 | 0 | 1.67e+04 | 1.40e+01 | NA | NA | NA | NA | 0 | 0 | 3.70e+03 | 1.19e+01 | NA | NA | NA | NA | 0 | 0 | 3.22e+03 | 1.17e+01 | NA | NA | NA | NA | 0 | 0 | 1.48e+04 | 1.39e+01 | 1.67e+04 | 1.40e+01 | 3.70e+03 | 1.19e+01 | 3.22e+03 | 1.17e+01 | | chr16 | 30930639 | 30934590 | uc002dzy.3 | 0.5261 | - | FBXL19-AS1 | antisense | 4.43e-02 | 1.44e-09 | 1.94e-02 | 1.07e-04 | 7.71e-03 | 7.5102 | 2.908852 | 5.8364 | 2.545070 | 4.90e+01 | 5.64e+00 | NA | NA | NA | NA | 0 | 0 | 5.50e+01 | 5.81e+00 | NA | NA | NA | NA | 0 | 0 | 3.68e+02 | 8.53e+00 | NA | NA | NA | NA | 0 | 0 | 3.21e+02 | 8.33e+00 | NA | NA | NA | NA | 0 | 0 | 4.90e+01 | 5.64e+00 | 5.50e+01 | 5.81e+00 | 3.68e+02 | 8.53e+00 | 3.21e+02 | 8.33e+00 | | chr6 | 21593971 | 21598849 | uc003ndi.3 | 0.5251 | + | SOX4 | protein_coding | 5.35e-03 | 3.58e-07 | 6.75e-04 | 1.09e-04 | 7.77e-03 | 0.2173 | -2.202308 | 0.1677 | -2.576456 | 3.00e+03 | 1.15e+01 | NA | NA | NA | NA | 0 | 0 | 3.38e+03 | 1.17e+01 | NA | NA | NA | NA | 0 | 0 | 6.51e+02 | 9.35e+00 | NA | NA | NA | NA | 0 | 0 | 5.67e+02 | 9.15e+00 | NA | NA | NA | NA | 0 | 0 | 3.00e+03 | 1.15e+01 | 3.38e+03 | 1.17e+01 | 6.51e+02 | 9.35e+00 | 5.67e+02 | 9.15e+00 | | chr8 | 27182995 | 27316908 | uc003xfp.2 | 0.4715 | + | PTK2B | protein_coding | 6.27e-02 | 7.89e-10 | 2.81e-02 | 1.12e-04 | 7.90e-03 | 8.2941 | 3.052089 | 6.4737 | 2.694587 | 3.40e+01 | 5.13e+00 | NA | NA | NA | NA | 0 | 0 | 3.80e+01 | 5.29e+00 | NA | NA | NA | NA | 0 | 0 | 2.82e+02 | 8.14e+00 | NA | NA | NA | NA | 0 | 0 | 2.46e+02 | 7.95e+00 | NA | NA | NA | NA | 0 | 0 | 3.40e+01 | 5.13e+00 | 3.80e+01 | 5.29e+00 | 2.82e+02 | 8.14e+00 | 2.46e+02 | 7.95e+00 | | chr8 | 63927638 | 63951610 | uc003xuw.3 | 0.3875 | - | GGH | protein_coding | 5.83e-03 | 3.48e-07 | 7.63e-04 | 1.16e-04 | 8.13e-03 | 0.2164 | -2.208528 | 0.1670 | -2.582153 | 2.73e+03 | 1.14e+01 | NA | NA | NA | NA | 0 | 0 | 3.08e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 5.90e+02 | 9.21e+00 | NA | NA | NA | NA | 0 | 0 | 5.14e+02 | 9.01e+00 | NA | NA | NA | NA | 0 | 0 | 2.73e+03 | 1.14e+01 | 3.08e+03 | 1.16e+01 | 5.90e+02 | 9.21e+00 | 5.14e+02 | 9.01e+00 | | chr7 | 139784545 | 139876741 | uc003vvm.3 | 0.3914 | - | KDM7A | protein_coding | 4.20e-02 | 2.42e-09 | 1.78e-02 | 1.22e-04 | 8.49e-03 | 7.1818 | 2.844349 | 5.5484 | 2.472068 | 5.50e+01 | 5.81e+00 | NA | NA | NA | NA | 0 | 0 | 6.20e+01 | 5.98e+00 | NA | NA | NA | NA | 0 | 0 | 3.95e+02 | 8.63e+00 | NA | NA | NA | NA | 0 | 0 | 3.44e+02 | 8.43e+00 | NA | NA | NA | NA | 0 | 0 | 5.50e+01 | 5.81e+00 | 6.20e+01 | 5.98e+00 | 3.95e+02 | 8.63e+00 | 3.44e+02 | 8.43e+00 | | chr17 | 18218593 | 18231370 | uc002gsy.4 | 0.5268 | + | SMCR8 | protein_coding | 6.04e-03 | 5.19e-07 | 6.80e-04 | 1.29e-04 | 8.92e-03 | 4.4940 | 2.167992 | 3.4653 | 1.792994 | 6.64e+02 | 9.38e+00 | NA | NA | NA | NA | 0 | 0 | 7.50e+02 | 9.55e+00 | NA | NA | NA | NA | 0 | 0 | 2.98e+03 | 1.15e+01 | NA | NA | NA | NA | 0 | 0 | 2.60e+03 | 1.13e+01 | NA | NA | NA | NA | 0 | 0 | 6.64e+02 | 9.38e+00 | 7.50e+02 | 9.55e+00 | 2.98e+03 | 1.15e+01 | 2.60e+03 | 1.13e+01 | | chr16 | 47189297 | 47495015 | uc002eet.3 | 0.3746 | - | ITFG1 | protein_coding | 5.63e-03 | 8.33e-07 | 4.67e-04 | 1.30e-04 | 8.93e-03 | 0.2296 | -2.122805 | 0.1772 | -2.496718 | 3.75e+03 | 1.19e+01 | NA | NA | NA | NA | 0 | 0 | 4.23e+03 | 1.20e+01 | NA | NA | NA | NA | 0 | 0 | 8.61e+02 | 9.75e+00 | NA | NA | NA | NA | 0 | 0 | 7.50e+02 | 9.55e+00 | NA | NA | NA | NA | 0 | 0 | 3.75e+03 | 1.19e+01 | 4.23e+03 | 1.20e+01 | 8.61e+02 | 9.75e+00 | 7.50e+02 | 9.55e+00 | | chr9 | 43684884 | 43922473 | uc004ada.2 | 0.3828 | + | CNTNAP3B | protein_coding | 3.09e-02 | 6.41e-09 | 1.25e-02 | 1.35e-04 | 9.22e-03 | 0.1529 | -2.708951 | 0.1181 | -3.082462 | 5.10e+02 | 9.00e+00 | NA | NA | NA | NA | 0 | 0 | 5.76e+02 | 9.17e+00 | NA | NA | NA | NA | 0 | 0 | 7.80e+01 | 6.30e+00 | NA | NA | NA | NA | 0 | 0 | 6.80e+01 | 6.11e+00 | NA | NA | NA | NA | 0 | 0 | 5.10e+02 | 9.00e+00 | 5.76e+02 | 9.17e+00 | 7.80e+01 | 6.30e+00 | 6.80e+01 | 6.11e+00 | | chr2 | 238395877 | 238463961 | uc002vwt.3 | 0.5133 | + | MLPH | protein_coding | 5.59e-03 | 1.90e-06 | 2.39e-04 | 1.36e-04 | 9.22e-03 | 0.2435 | -2.037852 | 0.1879 | -2.411943 | 5.64e+03 | 1.25e+01 | NA | NA | NA | NA | 0 | 0 | 6.36e+03 | 1.26e+01 | NA | NA | NA | NA | 0 | 0 | 1.37e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.20e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 5.64e+03 | 1.25e+01 | 6.36e+03 | 1.26e+01 | 1.37e+03 | 1.04e+01 | 1.20e+03 | 1.02e+01 | | chr7 | 29035246 | 29186153 | uc003szw.3 | 0.4102 | - | CPVL | protein_coding | 7.77e-03 | 2.16e-07 | 1.53e-03 | 1.37e-04 | 9.22e-03 | 0.2081 | -2.264850 | 0.1606 | -2.638174 | 1.91e+03 | 1.09e+01 | NA | NA | NA | NA | 0 | 0 | 2.15e+03 | 1.11e+01 | NA | NA | NA | NA | 0 | 0 | 3.97e+02 | 8.64e+00 | NA | NA | NA | NA | 0 | 0 | 3.46e+02 | 8.44e+00 | NA | NA | NA | NA | 0 | 0 | 1.91e+03 | 1.09e+01 | 2.15e+03 | 1.11e+01 | 3.97e+02 | 8.64e+00 | 3.46e+02 | 8.44e+00 | | chr6 | 34505578 | 34524110 | uc003ojq.2 | 0.5798 | - | SPDEF | protein_coding | 1.44e-02 | 3.76e-08 | 5.21e-03 | 1.41e-04 | 9.44e-03 | 0.1808 | -2.467747 | 0.1398 | -2.838411 | 9.57e+02 | 9.90e+00 | NA | NA | NA | NA | 0 | 0 | 1.08e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 1.73e+02 | 7.44e+00 | NA | NA | NA | NA | 0 | 0 | 1.51e+02 | 7.25e+00 | NA | NA | NA | NA | 0 | 0 | 9.57e+02 | 9.90e+00 | 1.08e+03 | 1.01e+01 | 1.73e+02 | 7.44e+00 | 1.51e+02 | 7.25e+00 | | chr1 | 6105980 | 6161253 | uc001aly.2 | 0.5611 | + | KCNAB2 | protein_coding | 5.58e-02 | 2.13e-09 | 2.42e-02 | 1.42e-04 | 9.44e-03 | 0.1274 | -2.972693 | 0.0986 | -3.342392 | 3.14e+02 | 8.30e+00 | NA | NA | NA | NA | 0 | 0 | 3.55e+02 | 8.48e+00 | NA | NA | NA | NA | 0 | 0 | 4.00e+01 | 5.36e+00 | NA | NA | NA | NA | 0 | 0 | 3.50e+01 | 5.17e+00 | NA | NA | NA | NA | 0 | 0 | 3.14e+02 | 8.30e+00 | 3.55e+02 | 8.48e+00 | 4.00e+01 | 5.36e+00 | 3.50e+01 | 5.17e+00 | | chr9 | 97365420 | 97401923 | uc004auw.4 | 0.4847 | - | FBP1 | protein_coding | 2.80e-02 | 1.06e-08 | 1.08e-02 | 1.48e-04 | 9.74e-03 | 6.2065 | 2.633785 | 4.7788 | 2.256662 | 9.20e+01 | 6.54e+00 | NA | NA | NA | NA | 0 | 0 | 1.04e+02 | 6.71e+00 | NA | NA | NA | NA | 0 | 0 | 5.71e+02 | 9.16e+00 | NA | NA | NA | NA | 0 | 0 | 4.97e+02 | 8.96e+00 | NA | NA | NA | NA | 0 | 0 | 9.20e+01 | 6.54e+00 | 1.04e+02 | 6.71e+00 | 5.71e+02 | 9.16e+00 | 4.97e+02 | 8.96e+00 | | chr6 | 31982571 | 32003195 | uc011dpd.2 | 0.5229 | + | C4B_2 | protein_coding | 1.04e-02 | 1.33e-07 | 2.67e-03 | 1.55e-04 | 1.01e-02 | 0.2006 | -2.317887 | 0.1547 | -2.692843 | 1.43e+03 | 1.05e+01 | NA | NA | NA | NA | 0 | 0 | 1.61e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 2.86e+02 | 8.16e+00 | NA | NA | NA | NA | 0 | 0 | 2.49e+02 | 7.97e+00 | NA | NA | NA | NA | 0 | 0 | 1.43e+03 | 1.05e+01 | 1.61e+03 | 1.07e+01 | 2.86e+02 | 8.16e+00 | 2.49e+02 | 7.97e+00 | | chr17 | 48712217 | 48769063 | uc002isl.3 | 0.5195 | + | ABCC3 | protein_coding | 8.99e-03 | 2.43e-07 | 1.87e-03 | 1.60e-04 | 1.04e-02 | 0.2092 | -2.256797 | 0.1616 | -2.629357 | 1.75e+03 | 1.08e+01 | NA | NA | NA | NA | 0 | 0 | 1.98e+03 | 1.10e+01 | NA | NA | NA | NA | 0 | 0 | 3.67e+02 | 8.52e+00 | NA | NA | NA | NA | 0 | 0 | 3.20e+02 | 8.33e+00 | NA | NA | NA | NA | 0 | 0 | 1.75e+03 | 1.08e+01 | 1.98e+03 | 1.10e+01 | 3.67e+02 | 8.52e+00 | 3.20e+02 | 8.33e+00 | | chr10 | 135075919 | 135090407 | uc021qbe.1 | 0.6379 | - | ADAM8 | protein_coding | 7.34e-03 | 1.06e-06 | 6.80e-04 | 1.74e-04 | 1.12e-02 | 0.2325 | -2.104621 | 0.1795 | -2.477807 | 3.04e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 3.44e+03 | 1.17e+01 | NA | NA | NA | NA | 0 | 0 | 7.08e+02 | 9.47e+00 | NA | NA | NA | NA | 0 | 0 | 6.17e+02 | 9.27e+00 | NA | NA | NA | NA | 0 | 0 | 3.04e+03 | 1.16e+01 | 3.44e+03 | 1.17e+01 | 7.08e+02 | 9.47e+00 | 6.17e+02 | 9.27e+00 | | chr2 | 169727400 | 169746944 | uc002uel.3 | 0.3768 | - | SPC25 | protein_coding | 1.48e-02 | 7.81e-08 | 4.58e-03 | 1.74e-04 | 1.12e-02 | 0.1910 | -2.388515 | 0.1471 | -2.765044 | 1.04e+03 | 1.00e+01 | NA | NA | NA | NA | 0 | 0 | 1.18e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 1.99e+02 | 7.64e+00 | NA | NA | NA | NA | 0 | 0 | 1.73e+02 | 7.44e+00 | NA | NA | NA | NA | 0 | 0 | 1.04e+03 | 1.00e+01 | 1.18e+03 | 1.02e+01 | 1.99e+02 | 7.64e+00 | 1.73e+02 | 7.44e+00 | | chr12 | 47469489 | 47473734 | uc001rpk.3 | 0.4458 | - | AMIGO2 | protein_coding | 7.01e-03 | 2.62e-06 | 3.12e-04 | 1.79e-04 | 1.14e-02 | 0.2483 | -2.009798 | 0.1916 | -2.383493 | 4.73e+03 | 1.22e+01 | NA | NA | NA | NA | 0 | 0 | 5.34e+03 | 1.24e+01 | NA | NA | NA | NA | 0 | 0 | 1.17e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 1.02e+03 | 1.00e+01 | NA | NA | NA | NA | 0 | 0 | 4.73e+03 | 1.22e+01 | 5.34e+03 | 1.24e+01 | 1.17e+03 | 1.02e+01 | 1.02e+03 | 1.00e+01 | | chr17 | 80376251 | 80400516 | uc002kev.4 | 0.5508 | + | HEXDC | protein_coding | 2.00e-02 | 4.87e-08 | 6.75e-03 | 1.87e-04 | 1.18e-02 | 0.1817 | -2.460324 | 0.1402 | -2.834471 | 8.09e+02 | 9.66e+00 | NA | NA | NA | NA | 0 | 0 | 9.13e+02 | 9.84e+00 | NA | NA | NA | NA | 0 | 0 | 1.47e+02 | 7.21e+00 | NA | NA | NA | NA | 0 | 0 | 1.28e+02 | 7.01e+00 | NA | NA | NA | NA | 0 | 0 | 8.09e+02 | 9.66e+00 | 9.13e+02 | 9.84e+00 | 1.47e+02 | 7.21e+00 | 1.28e+02 | 7.01e+00 | | chr1 | 29563027 | 29653325 | uc001bru.3 | 0.5158 | + | PTPRU | protein_coding | 9.10e-03 | 5.74e-07 | 1.26e-03 | 1.87e-04 | 1.18e-02 | 0.2222 | -2.170268 | 0.1715 | -2.543611 | 2.10e+03 | 1.10e+01 | NA | NA | NA | NA | 0 | 0 | 2.37e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 4.67e+02 | 8.87e+00 | NA | NA | NA | NA | 0 | 0 | 4.07e+02 | 8.67e+00 | NA | NA | NA | NA | 0 | 0 | 2.10e+03 | 1.10e+01 | 2.37e+03 | 1.12e+01 | 4.67e+02 | 8.87e+00 | 4.07e+02 | 8.67e+00 | | chr2 | 173420778 | 173463862 | uc002uhs.3 | 0.3915 | + | PDK1 | protein_coding | 1.64e-02 | 8.01e-08 | 5.12e-03 | 1.89e-04 | 1.18e-02 | 0.1908 | -2.389743 | 0.1474 | -2.762408 | 9.80e+02 | 9.94e+00 | NA | NA | NA | NA | 0 | 0 | 1.11e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 1.87e+02 | 7.55e+00 | NA | NA | NA | NA | 0 | 0 | 1.63e+02 | 7.36e+00 | NA | NA | NA | NA | 0 | 0 | 9.80e+02 | 9.94e+00 | 1.11e+03 | 1.01e+01 | 1.87e+02 | 7.55e+00 | 1.63e+02 | 7.36e+00 | | chr11 | 60691912 | 60704631 | uc001nqi.3 | 0.5873 | + | TMEM132A | protein_coding | 7.88e-03 | 1.26e-06 | 6.91e-04 | 1.90e-04 | 1.18e-02 | 0.2352 | -2.088305 | 0.1814 | -2.462845 | 3.00e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 3.38e+03 | 1.17e+01 | NA | NA | NA | NA | 0 | 0 | 7.05e+02 | 9.46e+00 | NA | NA | NA | NA | 0 | 0 | 6.14e+02 | 9.26e+00 | NA | NA | NA | NA | 0 | 0 | 3.00e+03 | 1.16e+01 | 3.38e+03 | 1.17e+01 | 7.05e+02 | 9.46e+00 | 6.14e+02 | 9.26e+00 | | chr12 | 69753531 | 69784576 | uc001sux.3 | 0.3931 | + | YEATS4 | protein_coding | 1.48e-02 | 1.14e-07 | 4.35e-03 | 1.94e-04 | 1.20e-02 | 0.1950 | -2.358216 | 0.1508 | -2.729538 | 1.09e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 1.23e+03 | 1.03e+01 | NA | NA | NA | NA | 0 | 0 | 2.12e+02 | 7.73e+00 | NA | NA | NA | NA | 0 | 0 | 1.85e+02 | 7.54e+00 | NA | NA | NA | NA | 0 | 0 | 1.09e+03 | 1.01e+01 | 1.23e+03 | 1.03e+01 | 2.12e+02 | 7.73e+00 | 1.85e+02 | 7.54e+00 | | chr1 | 220439520 | 220441057 | uc001hmj.2 | 0.4369 | - | AURKAPS1 | transcribed_processed_pseudogene | 6.03e-02 | 5.61e-09 | 2.26e-02 | 1.97e-04 | 1.20e-02 | 6.9792 | 2.803055 | 5.4074 | 2.434937 | 4.80e+01 | 5.61e+00 | NA | NA | NA | NA | 0 | 0 | 5.40e+01 | 5.78e+00 | NA | NA | NA | NA | 0 | 0 | 3.35e+02 | 8.39e+00 | NA | NA | NA | NA | 0 | 0 | 2.92e+02 | 8.19e+00 | NA | NA | NA | NA | 0 | 0 | 4.80e+01 | 5.61e+00 | 5.40e+01 | 5.78e+00 | 3.35e+02 | 8.39e+00 | 2.92e+02 | 8.19e+00 | | chr2 | 224839764 | 224904036 | uc002vnu.2 | 0.4320 | - | SERPINE2 | protein_coding | 8.04e-03 | 1.41e-06 | 6.80e-04 | 1.98e-04 | 1.20e-02 | 0.2369 | -2.077897 | 0.1828 | -2.451894 | 3.04e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 3.44e+03 | 1.17e+01 | NA | NA | NA | NA | 0 | 0 | 7.21e+02 | 9.50e+00 | NA | NA | NA | NA | 0 | 0 | 6.28e+02 | 9.30e+00 | NA | NA | NA | NA | 0 | 0 | 3.04e+03 | 1.16e+01 | 3.44e+03 | 1.17e+01 | 7.21e+02 | 9.50e+00 | 6.28e+02 | 9.30e+00 | | chr9 | 124062078 | 124095120 | uc004blf.1 | 0.4979 | + | GSN | protein_coding | 7.01e-03 | 5.83e-06 | 1.97e-04 | 2.01e-04 | 1.21e-02 | 0.2625 | -1.929593 | 0.2026 | -2.303419 | 7.96e+03 | 1.30e+01 | NA | NA | NA | NA | 0 | 0 | 8.98e+03 | 1.31e+01 | NA | NA | NA | NA | 0 | 0 | 2.09e+03 | 1.10e+01 | NA | NA | NA | NA | 0 | 0 | 1.82e+03 | 1.08e+01 | NA | NA | NA | NA | 0 | 0 | 7.96e+03 | 1.30e+01 | 8.98e+03 | 1.31e+01 | 2.09e+03 | 1.10e+01 | 1.82e+03 | 1.08e+01 | | chr19 | 44270684 | 44285409 | uc002oxl.3 | 0.5516 | - | KCNN4 | protein_coding | 8.20e-03 | 1.58e-06 | 6.80e-04 | 2.06e-04 | 1.24e-02 | 0.2386 | -2.067314 | 0.1841 | -2.441163 | 3.09e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 3.49e+03 | 1.18e+01 | NA | NA | NA | NA | 0 | 0 | 7.38e+02 | 9.53e+00 | NA | NA | NA | NA | 0 | 0 | 6.43e+02 | 9.33e+00 | NA | NA | NA | NA | 0 | 0 | 3.09e+03 | 1.16e+01 | 3.49e+03 | 1.18e+01 | 7.38e+02 | 9.53e+00 | 6.43e+02 | 9.33e+00 | | chr8 | 134249413 | 134256746 | uc003yue.2 | 0.4989 | - | NDRG1 | retained_intron | 7.39e-03 | 8.45e-06 | 1.61e-04 | 2.16e-04 | 1.29e-02 | 0.2694 | -1.892056 | 0.2079 | -2.266228 | 1.00e+04 | 1.33e+01 | NA | NA | NA | NA | 0 | 0 | 1.13e+04 | 1.35e+01 | NA | NA | NA | NA | 0 | 0 | 2.70e+03 | 1.14e+01 | NA | NA | NA | NA | 0 | 0 | 2.35e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 1.00e+04 | 1.33e+01 | 1.13e+04 | 1.35e+01 | 2.70e+03 | 1.14e+01 | 2.35e+03 | 1.12e+01 | | chr6 | 26440699 | 26453643 | uc003nhz.3 | 0.4407 | + | BTN3A3 | protein_coding | 2.60e-02 | 4.80e-08 | 8.68e-03 | 2.21e-04 | 1.32e-02 | 0.1793 | -2.479550 | 0.1382 | -2.854723 | 6.86e+02 | 9.42e+00 | NA | NA | NA | NA | 0 | 0 | 7.74e+02 | 9.60e+00 | NA | NA | NA | NA | 0 | 0 | 1.23e+02 | 6.95e+00 | NA | NA | NA | NA | 0 | 0 | 1.07e+02 | 6.75e+00 | NA | NA | NA | NA | 0 | 0 | 6.86e+02 | 9.42e+00 | 7.74e+02 | 9.60e+00 | 1.23e+02 | 6.95e+00 | 1.07e+02 | 6.75e+00 | | chr9 | 129849627 | 129885044 | uc004bqr.1 | 0.4984 | - | ANGPTL2 | protein_coding | 3.86e-02 | 2.34e-08 | 1.32e-02 | 2.28e-04 | 1.35e-02 | 0.1660 | -2.590745 | 0.1274 | -2.972182 | 5.00e+02 | 8.97e+00 | NA | NA | NA | NA | 0 | 0 | 5.65e+02 | 9.14e+00 | NA | NA | NA | NA | 0 | 0 | 8.30e+01 | 6.39e+00 | NA | NA | NA | NA | 0 | 0 | 7.20e+01 | 6.19e+00 | NA | NA | NA | NA | 0 | 0 | 5.00e+02 | 8.97e+00 | 5.65e+02 | 9.14e+00 | 8.30e+01 | 6.39e+00 | 7.20e+01 | 6.19e+00 | | chr19 | 49375648 | 49379319 | uc002pky.4 | 0.5667 | + | PPP1R15A | protein_coding | 7.69e-03 | 7.25e-06 | 2.18e-04 | 2.30e-04 | 1.35e-02 | 3.7519 | 1.907630 | 2.8952 | 1.533678 | 2.08e+03 | 1.10e+01 | NA | NA | NA | NA | 0 | 0 | 2.35e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 7.80e+03 | 1.29e+01 | NA | NA | NA | NA | 0 | 0 | 6.80e+03 | 1.27e+01 | NA | NA | NA | NA | 0 | 0 | 2.08e+03 | 1.10e+01 | 2.35e+03 | 1.12e+01 | 7.80e+03 | 1.29e+01 | 6.80e+03 | 1.27e+01 | | chr10 | 104433483 | 104474190 | uc001kwa.3 | 0.4459 | - | ARL3 | protein_coding | 1.00e-02 | 1.18e-06 | 1.09e-03 | 2.34e-04 | 1.37e-02 | 0.2328 | -2.103024 | 0.1797 | -2.476149 | 2.31e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 2.60e+03 | 1.13e+01 | NA | NA | NA | NA | 0 | 0 | 5.37e+02 | 9.07e+00 | NA | NA | NA | NA | 0 | 0 | 4.68e+02 | 8.87e+00 | NA | NA | NA | NA | 0 | 0 | 2.31e+03 | 1.12e+01 | 2.60e+03 | 1.13e+01 | 5.37e+02 | 9.07e+00 | 4.68e+02 | 8.87e+00 | | chr2 | 241375114 | 241407495 | uc002vyw.4 | 0.6462 | + | GPC1 | protein_coding | 9.47e-03 | 1.72e-06 | 8.15e-04 | 2.37e-04 | 1.37e-02 | 0.2395 | -2.062160 | 0.1848 | -2.435961 | 2.73e+03 | 1.14e+01 | NA | NA | NA | NA | 0 | 0 | 3.08e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 6.53e+02 | 9.35e+00 | NA | NA | NA | NA | 0 | 0 | 5.69e+02 | 9.15e+00 | NA | NA | NA | NA | 0 | 0 | 2.73e+03 | 1.14e+01 | 3.08e+03 | 1.16e+01 | 6.53e+02 | 9.35e+00 | 5.69e+02 | 9.15e+00 | | chr3 | 33038099 | 33138694 | uc003cfi.1 | 0.4402 | - | GLB1 | protein_coding | 8.37e-03 | 3.68e-06 | 4.47e-04 | 2.40e-04 | 1.38e-02 | 0.2537 | -1.978784 | 0.1958 | -2.352421 | 4.32e+03 | 1.21e+01 | NA | NA | NA | NA | 0 | 0 | 4.88e+03 | 1.23e+01 | NA | NA | NA | NA | 0 | 0 | 1.10e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 9.55e+02 | 9.90e+00 | NA | NA | NA | NA | 0 | 0 | 4.32e+03 | 1.21e+01 | 4.88e+03 | 1.23e+01 | 1.10e+03 | 1.01e+01 | 9.55e+02 | 9.90e+00 | | chr8 | 27454433 | 27472328 | uc003xfz.2 | 0.4969 | - | CLU | protein_coding | 1.51e-02 | 2.86e-07 | 3.42e-03 | 2.45e-04 | 1.41e-02 | 4.7425 | 2.245659 | 3.6656 | 1.874035 | 2.68e+02 | 8.07e+00 | NA | NA | NA | NA | 0 | 0 | 3.02e+02 | 8.24e+00 | NA | NA | NA | NA | 0 | 0 | 1.27e+03 | 1.03e+01 | NA | NA | NA | NA | 0 | 0 | 1.11e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 2.68e+02 | 8.07e+00 | 3.02e+02 | 8.24e+00 | 1.27e+03 | 1.03e+01 | 1.11e+03 | 1.01e+01 | | chrX | 39910498 | 39956719 | uc004den.4 | 0.5163 | - | BCOR | protein_coding | 1.20e-02 | 6.88e-07 | 1.96e-03 | 2.53e-04 | 1.44e-02 | 4.4582 | 2.156470 | 3.4395 | 1.782183 | 3.95e+02 | 8.63e+00 | NA | NA | NA | NA | 0 | 0 | 4.46e+02 | 8.80e+00 | NA | NA | NA | NA | 0 | 0 | 1.76e+03 | 1.08e+01 | NA | NA | NA | NA | 0 | 0 | 1.53e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 3.95e+02 | 8.63e+00 | 4.46e+02 | 8.80e+00 | 1.76e+03 | 1.08e+01 | 1.53e+03 | 1.06e+01 | | chr1 | 163038395 | 163046592 | uc001gcl.4 | 0.3955 | + | RGS4 | protein_coding | 4.84e-02 | 2.52e-08 | 1.62e-02 | 2.70e-04 | 1.53e-02 | 0.1636 | -2.611804 | 0.1265 | -2.982442 | 4.34e+02 | 8.76e+00 | NA | NA | NA | NA | 0 | 0 | 4.90e+02 | 8.94e+00 | NA | NA | NA | NA | 0 | 0 | 7.10e+01 | 6.17e+00 | NA | NA | NA | NA | 0 | 0 | 6.20e+01 | 5.98e+00 | NA | NA | NA | NA | 0 | 0 | 4.34e+02 | 8.76e+00 | 4.90e+02 | 8.94e+00 | 7.10e+01 | 6.17e+00 | 6.20e+01 | 5.98e+00 | | chr17 | 21187967 | 21218551 | uc002gys.3 | 0.5699 | + | MAP2K3 | protein_coding | 1.03e-02 | 3.04e-06 | 7.06e-04 | 2.81e-04 | 1.58e-02 | 4.0092 | 2.003327 | 3.0923 | 1.628675 | 7.58e+02 | 9.57e+00 | NA | NA | NA | NA | 0 | 0 | 8.56e+02 | 9.74e+00 | NA | NA | NA | NA | 0 | 0 | 3.04e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 2.65e+03 | 1.14e+01 | NA | NA | NA | NA | 0 | 0 | 7.58e+02 | 9.57e+00 | 8.56e+02 | 9.74e+00 | 3.04e+03 | 1.16e+01 | 2.65e+03 | 1.14e+01 | | chr5 | 173315330 | 173387313 | uc003mcs.4 | 0.3734 | + | CPEB4 | protein_coding | 1.51e-02 | 5.45e-07 | 2.97e-03 | 2.90e-04 | 1.62e-02 | 4.5584 | 2.188541 | 3.5144 | 1.813265 | 3.08e+02 | 8.27e+00 | NA | NA | NA | NA | 0 | 0 | 3.48e+02 | 8.45e+00 | NA | NA | NA | NA | 0 | 0 | 1.40e+03 | 1.05e+01 | NA | NA | NA | NA | 0 | 0 | 1.22e+03 | 1.03e+01 | NA | NA | NA | NA | 0 | 0 | 3.08e+02 | 8.27e+00 | 3.48e+02 | 8.45e+00 | 1.40e+03 | 1.05e+01 | 1.22e+03 | 1.03e+01 | | chr6 | 31949833 | 31970458 | uc011doy.2 | 0.5227 | + | C4B_2 | protein_coding | 1.51e-02 | 5.81e-07 | 2.92e-03 | 2.95e-04 | 1.63e-02 | 0.2199 | -2.184796 | 0.1698 | -2.558096 | 1.41e+03 | 1.05e+01 | NA | NA | NA | NA | 0 | 0 | 1.60e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 3.11e+02 | 8.29e+00 | NA | NA | NA | NA | 0 | 0 | 2.71e+02 | 8.09e+00 | NA | NA | NA | NA | 0 | 0 | 1.41e+03 | 1.05e+01 | 1.60e+03 | 1.06e+01 | 3.11e+02 | 8.29e+00 | 2.71e+02 | 8.09e+00 | | chr3 | 157154579 | 157161417 | uc003fbl.4 | 0.4275 | + | PTX3 | protein_coding | 9.74e-03 | 6.58e-06 | 4.00e-04 | 2.95e-04 | 1.63e-02 | 0.2639 | -1.921965 | 0.2036 | -2.296007 | 4.64e+03 | 1.22e+01 | NA | NA | NA | NA | 0 | 0 | 5.24e+03 | 1.24e+01 | NA | NA | NA | NA | 0 | 0 | 1.22e+03 | 1.03e+01 | NA | NA | NA | NA | 0 | 0 | 1.07e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 4.64e+03 | 1.22e+01 | 5.24e+03 | 1.24e+01 | 1.22e+03 | 1.03e+01 | 1.07e+03 | 1.01e+01 | | chr2 | 70436575 | 70475779 | uc002sgj.4 | 0.3967 | - | TIA1 | protein_coding | 1.03e-02 | 3.70e-06 | 7.01e-04 | 2.98e-04 | 1.64e-02 | 0.2527 | -1.984692 | 0.1949 | -2.359013 | 3.28e+03 | 1.17e+01 | NA | NA | NA | NA | 0 | 0 | 3.70e+03 | 1.19e+01 | NA | NA | NA | NA | 0 | 0 | 8.29e+02 | 9.70e+00 | NA | NA | NA | NA | 0 | 0 | 7.22e+02 | 9.50e+00 | NA | NA | NA | NA | 0 | 0 | 3.28e+03 | 1.17e+01 | 3.70e+03 | 1.19e+01 | 8.29e+02 | 9.70e+00 | 7.22e+02 | 9.50e+00 | | chr8 | 145736666 | 145743210 | uc003zdj.3 | 0.6550 | - | RECQL4 | protein_coding | 9.60e-03 | 8.81e-06 | 3.22e-04 | 3.01e-04 | 1.65e-02 | 0.2694 | -1.892101 | 0.2079 | -2.265840 | 5.65e+03 | 1.25e+01 | NA | NA | NA | NA | 0 | 0 | 6.38e+03 | 1.26e+01 | NA | NA | NA | NA | 0 | 0 | 1.52e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 1.33e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 5.65e+03 | 1.25e+01 | 6.38e+03 | 1.26e+01 | 1.52e+03 | 1.06e+01 | 1.33e+03 | 1.04e+01 | | chr12 | 7023613 | 7032859 | uc001qru.1 | 0.5488 | + | ENO2 | protein_coding | 9.97e-03 | 6.41e-06 | 4.36e-04 | 3.03e-04 | 1.65e-02 | 0.2632 | -1.925606 | 0.2032 | -2.299181 | 4.40e+03 | 1.21e+01 | NA | NA | NA | NA | 0 | 0 | 4.97e+03 | 1.23e+01 | NA | NA | NA | NA | 0 | 0 | 1.16e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 1.01e+03 | 9.98e+00 | NA | NA | NA | NA | 0 | 0 | 4.40e+03 | 1.21e+01 | 4.97e+03 | 1.23e+01 | 1.16e+03 | 1.02e+01 | 1.01e+03 | 9.98e+00 | | chr9 | 123664670 | 123691451 | uc010mvl.2 | 0.4994 | - | TRAF1 | protein_coding | 2.02e-02 | 3.00e-07 | 4.81e-03 | 3.08e-04 | 1.67e-02 | 4.7752 | 2.255570 | 3.6870 | 1.882444 | 2.18e+02 | 7.77e+00 | NA | NA | NA | NA | 0 | 0 | 2.46e+02 | 7.95e+00 | NA | NA | NA | NA | 0 | 0 | 1.04e+03 | 1.00e+01 | NA | NA | NA | NA | 0 | 0 | 9.07e+02 | 9.83e+00 | NA | NA | NA | NA | 0 | 0 | 2.18e+02 | 7.77e+00 | 2.46e+02 | 7.95e+00 | 1.04e+03 | 1.00e+01 | 9.07e+02 | 9.83e+00 | | chr20 | 23614293 | 23618574 | uc002wtn.1 | 0.5710 | - | CST3 | protein_coding | 9.56e-03 | 1.49e-05 | 2.13e-04 | 3.12e-04 | 1.68e-02 | 0.2798 | -1.837342 | 0.2160 | -2.211138 | 8.82e+03 | 1.31e+01 | NA | NA | NA | NA | 0 | 0 | 9.96e+03 | 1.33e+01 | NA | NA | NA | NA | 0 | 0 | 2.47e+03 | 1.13e+01 | NA | NA | NA | NA | 0 | 0 | 2.15e+03 | 1.11e+01 | NA | NA | NA | NA | 0 | 0 | 8.82e+03 | 1.31e+01 | 9.96e+03 | 1.33e+01 | 2.47e+03 | 1.13e+01 | 2.15e+03 | 1.11e+01 | | chr16 | 64980682 | 65155919 | uc002eoi.3 | 0.4012 | - | CDH11 | protein_coding | 2.14e-02 | 2.69e-07 | 5.42e-03 | 3.15e-04 | 1.68e-02 | 0.2048 | -2.287841 | 0.1584 | -2.658544 | 9.62e+02 | 9.91e+00 | NA | NA | NA | NA | 0 | 0 | 1.09e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 1.97e+02 | 7.63e+00 | NA | NA | NA | NA | 0 | 0 | 1.72e+02 | 7.43e+00 | NA | NA | NA | NA | 0 | 0 | 9.62e+02 | 9.91e+00 | 1.09e+03 | 1.01e+01 | 1.97e+02 | 7.63e+00 | 1.72e+02 | 7.43e+00 | | chr12 | 111051831 | 111086935 | uc001trn.4 | 0.4436 | + | TCTN1 | protein_coding | 2.08e-02 | 3.00e-07 | 5.10e-03 | 3.17e-04 | 1.68e-02 | 0.2078 | -2.267055 | 0.1602 | -2.641952 | 1.01e+03 | 9.98e+00 | NA | NA | NA | NA | 0 | 0 | 1.14e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 2.09e+02 | 7.71e+00 | NA | NA | NA | NA | 0 | 0 | 1.82e+02 | 7.52e+00 | NA | NA | NA | NA | 0 | 0 | 1.01e+03 | 9.98e+00 | 1.14e+03 | 1.02e+01 | 2.09e+02 | 7.71e+00 | 1.82e+02 | 7.52e+00 | | chr1 | 9908333 | 9970316 | uc001aql.1 | 0.5135 | - | CTNNBIP1 | protein_coding | 1.47e-02 | 8.74e-07 | 2.50e-03 | 3.18e-04 | 1.68e-02 | 0.2263 | -2.143656 | 0.1748 | -2.516576 | 1.55e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 1.75e+03 | 1.08e+01 | NA | NA | NA | NA | 0 | 0 | 3.51e+02 | 8.46e+00 | NA | NA | NA | NA | 0 | 0 | 3.06e+02 | 8.26e+00 | NA | NA | NA | NA | 0 | 0 | 1.55e+03 | 1.06e+01 | 1.75e+03 | 1.08e+01 | 3.51e+02 | 8.46e+00 | 3.06e+02 | 8.26e+00 | | chr20 | 50003493 | 50159258 | uc002xwd.4 | 0.4794 | - | NFATC2 | protein_coding | 2.07e-02 | 3.19e-07 | 4.93e-03 | 3.19e-04 | 1.68e-02 | 4.7767 | 2.256028 | 3.6831 | 1.880931 | 2.15e+02 | 7.75e+00 | NA | NA | NA | NA | 0 | 0 | 2.43e+02 | 7.93e+00 | NA | NA | NA | NA | 0 | 0 | 1.03e+03 | 1.00e+01 | NA | NA | NA | NA | 0 | 0 | 8.95e+02 | 9.81e+00 | NA | NA | NA | NA | 0 | 0 | 2.15e+02 | 7.75e+00 | 2.43e+02 | 7.93e+00 | 1.03e+03 | 1.00e+01 | 8.95e+02 | 9.81e+00 | | chr11 | 61382507 | 61406921 | uc001nrz.1 | 0.5110 | + | RPLP0P2 | processed_transcript | 1.69e-02 | 6.43e-07 | 3.25e-03 | 3.28e-04 | 1.71e-02 | 4.4983 | 2.169389 | 3.4777 | 1.798152 | 2.99e+02 | 8.23e+00 | NA | NA | NA | NA | 0 | 0 | 3.37e+02 | 8.40e+00 | NA | NA | NA | NA | 0 | 0 | 1.34e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.17e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 2.99e+02 | 8.23e+00 | 3.37e+02 | 8.40e+00 | 1.34e+03 | 1.04e+01 | 1.17e+03 | 1.02e+01 | | chr12 | 77252495 | 77272799 | uc001syl.1 | 0.4234 | - | CSRP2 | protein_coding | 1.30e-02 | 1.87e-06 | 1.45e-03 | 3.28e-04 | 1.71e-02 | 0.2395 | -2.061829 | 0.1850 | -2.434706 | 2.05e+03 | 1.10e+01 | NA | NA | NA | NA | 0 | 0 | 2.31e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 4.91e+02 | 8.94e+00 | NA | NA | NA | NA | 0 | 0 | 4.28e+02 | 8.74e+00 | NA | NA | NA | NA | 0 | 0 | 2.05e+03 | 1.10e+01 | 2.31e+03 | 1.12e+01 | 4.91e+02 | 8.94e+00 | 4.28e+02 | 8.74e+00 | | chr3 | 192514604 | 192635950 | uc011bsp.2 | 0.4273 | - | MB21D2 | protein_coding | 4.75e-02 | 5.59e-08 | 1.43e-02 | 3.36e-04 | 1.74e-02 | 5.6905 | 2.508549 | 4.3789 | 2.130584 | 8.40e+01 | 6.41e+00 | NA | NA | NA | NA | 0 | 0 | 9.50e+01 | 6.58e+00 | NA | NA | NA | NA | 0 | 0 | 4.78e+02 | 8.90e+00 | NA | NA | NA | NA | 0 | 0 | 4.16e+02 | 8.70e+00 | NA | NA | NA | NA | 0 | 0 | 8.40e+01 | 6.41e+00 | 9.50e+01 | 6.58e+00 | 4.78e+02 | 8.90e+00 | 4.16e+02 | 8.70e+00 | | chr2 | 220094478 | 220101391 | uc002vkg.3 | 0.4912 | + | ANKZF1 | protein_coding | 1.11e-02 | 6.55e-06 | 5.45e-04 | 3.41e-04 | 1.76e-02 | 0.2635 | -1.924264 | 0.2032 | -2.298712 | 3.82e+03 | 1.19e+01 | NA | NA | NA | NA | 0 | 0 | 4.32e+03 | 1.21e+01 | NA | NA | NA | NA | 0 | 0 | 1.01e+03 | 9.98e+00 | NA | NA | NA | NA | 0 | 0 | 8.77e+02 | 9.78e+00 | NA | NA | NA | NA | 0 | 0 | 3.82e+03 | 1.19e+01 | 4.32e+03 | 1.21e+01 | 1.01e+03 | 9.98e+00 | 8.77e+02 | 9.78e+00 | | chrX | 77359665 | 77382324 | uc004ecz.4 | 0.4145 | + | PGK1 | protein_coding | 8.49e-03 | 2.37e-05 | 2.13e-04 | 3.50e-04 | 1.78e-02 | 0.2898 | -1.786689 | 0.2237 | -2.160677 | 4.35e+04 | 1.54e+01 | NA | NA | NA | NA | 0 | 0 | 4.91e+04 | 1.56e+01 | NA | NA | NA | NA | 0 | 0 | 1.26e+04 | 1.36e+01 | NA | NA | NA | NA | 0 | 0 | 1.10e+04 | 1.34e+01 | NA | NA | NA | NA | 0 | 0 | 4.35e+04 | 1.54e+01 | 4.91e+04 | 1.56e+01 | 1.26e+04 | 1.36e+01 | 1.10e+04 | 1.34e+01 | | chr1 | 53392900 | 53517289 | uc001cur.2 | 0.4002 | + | SCP2 | protein_coding | 1.14e-02 | 6.27e-06 | 6.13e-04 | 3.52e-04 | 1.78e-02 | 0.2626 | -1.928871 | 0.2025 | -2.303693 | 3.62e+03 | 1.18e+01 | NA | NA | NA | NA | 0 | 0 | 4.09e+03 | 1.20e+01 | NA | NA | NA | NA | 0 | 0 | 9.51e+02 | 9.89e+00 | NA | NA | NA | NA | 0 | 0 | 8.28e+02 | 9.70e+00 | NA | NA | NA | NA | 0 | 0 | 3.62e+03 | 1.18e+01 | 4.09e+03 | 1.20e+01 | 9.51e+02 | 9.89e+00 | 8.28e+02 | 9.70e+00 | | chr17 | 72733355 | 72743474 | uc002jlk.3 | 0.5522 | + | RAB37 | protein_coding | 5.58e-02 | 4.58e-08 | 1.73e-02 | 3.54e-04 | 1.78e-02 | 0.1699 | -2.557612 | 0.1314 | -2.928447 | 4.18e+02 | 8.71e+00 | NA | NA | NA | NA | 0 | 0 | 4.72e+02 | 8.89e+00 | NA | NA | NA | NA | 0 | 0 | 7.10e+01 | 6.17e+00 | NA | NA | NA | NA | 0 | 0 | 6.20e+01 | 5.98e+00 | NA | NA | NA | NA | 0 | 0 | 4.18e+02 | 8.71e+00 | 4.72e+02 | 8.89e+00 | 7.10e+01 | 6.17e+00 | 6.20e+01 | 5.98e+00 | | chr1 | 210404803 | 210407466 | uc001hhx.4 | 0.5796 | - | SERTAD4-AS1 | antisense | 7.26e-02 | 2.62e-08 | 2.37e-02 | 3.56e-04 | 1.78e-02 | 0.1576 | -2.665882 | 0.1206 | -3.051179 | 3.30e+02 | 8.37e+00 | NA | NA | NA | NA | 0 | 0 | 3.73e+02 | 8.55e+00 | NA | NA | NA | NA | 0 | 0 | 5.20e+01 | 5.73e+00 | NA | NA | NA | NA | 0 | 0 | 4.50e+01 | 5.52e+00 | NA | NA | NA | NA | 0 | 0 | 3.30e+02 | 8.37e+00 | 3.73e+02 | 8.55e+00 | 5.20e+01 | 5.73e+00 | 4.50e+01 | 5.52e+00 | | chr3 | 167453431 | 167543357 | uc003ffa.4 | 0.3670 | + | SERPINI1 | protein_coding | 4.88e-02 | 6.20e-08 | 1.49e-02 | 3.56e-04 | 1.78e-02 | 0.1732 | -2.529821 | 0.1344 | -2.895857 | 4.62e+02 | 8.85e+00 | NA | NA | NA | NA | 0 | 0 | 5.21e+02 | 9.03e+00 | NA | NA | NA | NA | 0 | 0 | 8.00e+01 | 6.34e+00 | NA | NA | NA | NA | 0 | 0 | 7.00e+01 | 6.15e+00 | NA | NA | NA | NA | 0 | 0 | 4.62e+02 | 8.85e+00 | 5.21e+02 | 9.03e+00 | 8.00e+01 | 6.34e+00 | 7.00e+01 | 6.15e+00 | | chr7 | 144052488 | 144077725 | uc003wel.3 | 0.4796 | + | ARHGEF5 | protein_coding | 5.42e-02 | 5.25e-08 | 1.63e-02 | 3.59e-04 | 1.78e-02 | 5.7500 | 2.523562 | 4.4302 | 2.147382 | 7.60e+01 | 6.27e+00 | NA | NA | NA | NA | 0 | 0 | 8.60e+01 | 6.44e+00 | NA | NA | NA | NA | 0 | 0 | 4.37e+02 | 8.77e+00 | NA | NA | NA | NA | 0 | 0 | 3.81e+02 | 8.58e+00 | NA | NA | NA | NA | 0 | 0 | 7.60e+01 | 6.27e+00 | 8.60e+01 | 6.44e+00 | 4.37e+02 | 8.77e+00 | 3.81e+02 | 8.58e+00 | | chr8 | 141541263 | 141645646 | uc003yvn.3 | 0.5189 | - | AGO2 | protein_coding | 1.12e-02 | 1.11e-05 | 3.79e-04 | 3.61e-04 | 1.78e-02 | 3.6536 | 1.869305 | 2.8195 | 1.495425 | 1.37e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.55e+03 | 1.06e+01 | NA | NA | NA | NA | 0 | 0 | 5.02e+03 | 1.23e+01 | NA | NA | NA | NA | 0 | 0 | 4.37e+03 | 1.21e+01 | NA | NA | NA | NA | 0 | 0 | 1.37e+03 | 1.04e+01 | 1.55e+03 | 1.06e+01 | 5.02e+03 | 1.23e+01 | 4.37e+03 | 1.21e+01 | | chr4 | 108910869 | 108956331 | uc010ilx.3 | 0.4313 | + | HADH | protein_coding | 1.50e-02 | 1.52e-06 | 2.07e-03 | 3.61e-04 | 1.78e-02 | 0.2357 | -2.084763 | 0.1817 | -2.460168 | 1.74e+03 | 1.08e+01 | NA | NA | NA | NA | 0 | 0 | 1.96e+03 | 1.09e+01 | NA | NA | NA | NA | 0 | 0 | 4.09e+02 | 8.68e+00 | NA | NA | NA | NA | 0 | 0 | 3.56e+02 | 8.48e+00 | NA | NA | NA | NA | 0 | 0 | 1.74e+03 | 1.08e+01 | 1.96e+03 | 1.09e+01 | 4.09e+02 | 8.68e+00 | 3.56e+02 | 8.48e+00 | | chr10 | 75670861 | 75677258 | uc001jwa.3 | 0.5436 | + | PLAU | protein_coding | 9.12e-03 | 2.46e-05 | 2.13e-04 | 3.63e-04 | 1.78e-02 | 0.2904 | -1.783769 | 0.2241 | -2.157753 | 2.55e+04 | 1.46e+01 | NA | NA | NA | NA | 0 | 0 | 2.88e+04 | 1.48e+01 | NA | NA | NA | NA | 0 | 0 | 7.41e+03 | 1.29e+01 | NA | NA | NA | NA | 0 | 0 | 6.45e+03 | 1.27e+01 | NA | NA | NA | NA | 0 | 0 | 2.55e+04 | 1.46e+01 | 2.88e+04 | 1.48e+01 | 7.41e+03 | 1.29e+01 | 6.45e+03 | 1.27e+01 | | chr1 | 163291722 | 163325553 | uc001gcr.1 | 0.3455 | + | NUF2 | protein_coding | 1.40e-02 | 2.51e-06 | 1.43e-03 | 3.69e-04 | 1.80e-02 | 0.2441 | -2.034511 | 0.1885 | -2.407658 | 2.07e+03 | 1.10e+01 | NA | NA | NA | NA | 0 | 0 | 2.34e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 5.06e+02 | 8.99e+00 | NA | NA | NA | NA | 0 | 0 | 4.41e+02 | 8.79e+00 | NA | NA | NA | NA | 0 | 0 | 2.07e+03 | 1.10e+01 | 2.34e+03 | 1.12e+01 | 5.06e+02 | 8.99e+00 | 4.41e+02 | 8.79e+00 | | chr3 | 51575595 | 51697612 | uc011bdt.2 | 0.4430 | + | RAD54L2 | protein_coding | 1.80e-02 | 8.69e-07 | 3.26e-03 | 3.71e-04 | 1.80e-02 | 4.4118 | 2.141356 | 3.4087 | 1.769220 | 3.06e+02 | 8.26e+00 | NA | NA | NA | NA | 0 | 0 | 3.45e+02 | 8.43e+00 | NA | NA | NA | NA | 0 | 0 | 1.35e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.18e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 3.06e+02 | 8.26e+00 | 3.45e+02 | 8.43e+00 | 1.35e+03 | 1.04e+01 | 1.18e+03 | 1.02e+01 | | chr6 | 29857104 | 29858668 | uc021ytx.1 | 0.5470 | + | HLA-H | unprocessed_pseudogene | 1.11e-02 | 1.90e-05 | 2.65e-04 | 3.82e-04 | 1.85e-02 | 0.2846 | -1.813210 | 0.2195 | -2.187479 | 7.65e+03 | 1.29e+01 | NA | NA | NA | NA | 0 | 0 | 8.64e+03 | 1.31e+01 | NA | NA | NA | NA | 0 | 0 | 2.18e+03 | 1.11e+01 | NA | NA | NA | NA | 0 | 0 | 1.90e+03 | 1.09e+01 | NA | NA | NA | NA | 0 | 0 | 7.65e+03 | 1.29e+01 | 8.64e+03 | 1.31e+01 | 2.18e+03 | 1.11e+01 | 1.90e+03 | 1.09e+01 | | chr17 | 2240805 | 2284348 | uc002fum.4 | 0.5498 | + | SGSM2 | protein_coding | 1.17e-02 | 1.23e-05 | 4.10e-04 | 3.89e-04 | 1.86e-02 | 0.2754 | -1.860194 | 0.2125 | -2.234542 | 4.89e+03 | 1.23e+01 | NA | NA | NA | NA | 0 | 0 | 5.52e+03 | 1.24e+01 | NA | NA | NA | NA | 0 | 0 | 1.35e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.17e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 4.89e+03 | 1.23e+01 | 5.52e+03 | 1.24e+01 | 1.35e+03 | 1.04e+01 | 1.17e+03 | 1.02e+01 | | chr16 | 128168 | 135850 | uc002cfo.4 | 0.6078 | + | MPG | protein_coding | 1.85e-02 | 9.60e-07 | 3.38e-03 | 3.92e-04 | 1.86e-02 | 0.2260 | -2.145430 | 0.1746 | -2.517495 | 1.31e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 1.48e+03 | 1.05e+01 | NA | NA | NA | NA | 0 | 0 | 2.97e+02 | 8.22e+00 | NA | NA | NA | NA | 0 | 0 | 2.59e+02 | 8.02e+00 | NA | NA | NA | NA | 0 | 0 | 1.31e+03 | 1.04e+01 | 1.48e+03 | 1.05e+01 | 2.97e+02 | 8.22e+00 | 2.59e+02 | 8.02e+00 | | chr8 | 134249413 | 134309547 | uc003yug.2 | 0.5038 | - | NDRG1 | protein_coding | 9.79e-03 | 2.83e-05 | 2.18e-04 | 3.93e-04 | 1.86e-02 | 0.2933 | -1.769373 | 0.2263 | -2.143491 | 2.32e+04 | 1.45e+01 | NA | NA | NA | NA | 0 | 0 | 2.62e+04 | 1.47e+01 | NA | NA | NA | NA | 0 | 0 | 6.80e+03 | 1.27e+01 | NA | NA | NA | NA | 0 | 0 | 5.92e+03 | 1.25e+01 | NA | NA | NA | NA | 0 | 0 | 2.32e+04 | 1.45e+01 | 2.62e+04 | 1.47e+01 | 6.80e+03 | 1.27e+01 | 5.92e+03 | 1.25e+01 | | chr1 | 89573309 | 89591799 | uc001dmz.1 | 0.3726 | - | GBP2 | protein_coding | 2.46e-02 | 4.42e-07 | 5.60e-03 | 3.93e-04 | 1.86e-02 | 0.2126 | -2.233572 | 0.1640 | -2.608003 | 9.50e+02 | 9.89e+00 | NA | NA | NA | NA | 0 | 0 | 1.07e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 2.02e+02 | 7.67e+00 | NA | NA | NA | NA | 0 | 0 | 1.76e+02 | 7.47e+00 | NA | NA | NA | NA | 0 | 0 | 9.50e+02 | 9.89e+00 | 1.07e+03 | 1.01e+01 | 2.02e+02 | 7.67e+00 | 1.76e+02 | 7.47e+00 | | chr5 | 92919042 | 92929786 | uc003kkj.3 | 0.5128 | + | NR2F1 | protein_coding | 1.45e-02 | 3.18e-06 | 1.32e-03 | 3.94e-04 | 1.86e-02 | 0.2486 | -2.008097 | 0.1917 | -2.382810 | 2.14e+03 | 1.11e+01 | NA | NA | NA | NA | 0 | 0 | 2.42e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 5.33e+02 | 9.06e+00 | NA | NA | NA | NA | 0 | 0 | 4.64e+02 | 8.86e+00 | NA | NA | NA | NA | 0 | 0 | 2.14e+03 | 1.11e+01 | 2.42e+03 | 1.12e+01 | 5.33e+02 | 9.06e+00 | 4.64e+02 | 8.86e+00 | | chr14 | 105939274 | 105946507 | uc031qqr.1 | 0.6953 | + | CRIP2 | protein_coding | 2.06e-02 | 7.47e-07 | 4.12e-03 | 3.98e-04 | 1.86e-02 | 0.2215 | -2.174887 | 0.1711 | -2.547066 | 1.16e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 1.32e+03 | 1.04e+01 | NA | NA | NA | NA | 0 | 0 | 2.58e+02 | 8.02e+00 | NA | NA | NA | NA | 0 | 0 | 2.25e+02 | 7.82e+00 | NA | NA | NA | NA | 0 | 0 | 1.16e+03 | 1.02e+01 | 1.32e+03 | 1.04e+01 | 2.58e+02 | 8.02e+00 | 2.25e+02 | 7.82e+00 | | chr10 | 74766979 | 74856732 | uc001jtg.3 | 0.3879 | - | P4HA1 | protein_coding | 1.28e-02 | 6.60e-06 | 7.48e-04 | 3.98e-04 | 1.86e-02 | 0.2625 | -1.929501 | 0.2026 | -2.303297 | 3.14e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 3.54e+03 | 1.18e+01 | NA | NA | NA | NA | 0 | 0 | 8.23e+02 | 9.69e+00 | NA | NA | NA | NA | 0 | 0 | 7.17e+02 | 9.49e+00 | NA | NA | NA | NA | 0 | 0 | 3.14e+03 | 1.16e+01 | 3.54e+03 | 1.18e+01 | 8.23e+02 | 9.69e+00 | 7.17e+02 | 9.49e+00 | | chr1 | 155829259 | 155854990 | uc001fmg.3 | 0.4651 | + | SYT11 | protein_coding | 7.79e-02 | 3.34e-08 | 2.46e-02 | 4.00e-04 | 1.86e-02 | 6.2115 | 2.634951 | 4.7627 | 2.251783 | 5.20e+01 | 5.73e+00 | NA | NA | NA | NA | 0 | 0 | 5.90e+01 | 5.91e+00 | NA | NA | NA | NA | 0 | 0 | 3.23e+02 | 8.34e+00 | NA | NA | NA | NA | 0 | 0 | 2.81e+02 | 8.14e+00 | NA | NA | NA | NA | 0 | 0 | 5.20e+01 | 5.73e+00 | 5.90e+01 | 5.91e+00 | 3.23e+02 | 8.34e+00 | 2.81e+02 | 8.14e+00 | | chr16 | 50775960 | 50835846 | uc002egq.1 | 0.3642 | + | CYLD | protein_coding | 1.30e-02 | 1.07e-05 | 5.45e-04 | 4.23e-04 | 1.95e-02 | 3.6676 | 1.874840 | 2.8299 | 1.500730 | 1.06e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 1.20e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 3.90e+03 | 1.19e+01 | NA | NA | NA | NA | 0 | 0 | 3.39e+03 | 1.17e+01 | NA | NA | NA | NA | 0 | 0 | 1.06e+03 | 1.01e+01 | 1.20e+03 | 1.02e+01 | 3.90e+03 | 1.19e+01 | 3.39e+03 | 1.17e+01 | | chr15 | 100106132 | 100256629 | uc002bvf.3 | 0.3675 | + | MEF2A | protein_coding | 1.30e-02 | 9.72e-06 | 6.02e-04 | 4.24e-04 | 1.95e-02 | 3.6947 | 1.885455 | 2.8502 | 1.511052 | 9.99e+02 | 9.97e+00 | NA | NA | NA | NA | 0 | 0 | 1.13e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 3.69e+03 | 1.19e+01 | NA | NA | NA | NA | 0 | 0 | 3.22e+03 | 1.17e+01 | NA | NA | NA | NA | 0 | 0 | 9.99e+02 | 9.97e+00 | 1.13e+03 | 1.01e+01 | 3.69e+03 | 1.19e+01 | 3.22e+03 | 1.17e+01 | | chr16 | 56700652 | 56701977 | uc002eju.1 | 0.5415 | - | MT1G | protein_coding | 3.49e-02 | 2.62e-07 | 8.90e-03 | 4.33e-04 | 1.99e-02 | 0.2003 | -2.319836 | 0.1542 | -2.696736 | 6.89e+02 | 9.43e+00 | NA | NA | NA | NA | 0 | 0 | 7.78e+02 | 9.61e+00 | NA | NA | NA | NA | 0 | 0 | 1.38e+02 | 7.12e+00 | NA | NA | NA | NA | 0 | 0 | 1.20e+02 | 6.92e+00 | NA | NA | NA | NA | 0 | 0 | 6.89e+02 | 9.43e+00 | 7.78e+02 | 9.61e+00 | 1.38e+02 | 7.12e+00 | 1.20e+02 | 6.92e+00 | | chr5 | 179382473 | 179499109 | uc003mll.1 | 0.4235 | - | RNF130 | protein_coding | 1.50e-02 | 5.37e-06 | 1.09e-03 | 4.45e-04 | 2.03e-02 | 0.2578 | -1.955913 | 0.1990 | -2.329348 | 2.42e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 2.73e+03 | 1.14e+01 | NA | NA | NA | NA | 0 | 0 | 6.23e+02 | 9.29e+00 | NA | NA | NA | NA | 0 | 0 | 5.43e+02 | 9.09e+00 | NA | NA | NA | NA | 0 | 0 | 2.42e+03 | 1.12e+01 | 2.73e+03 | 1.14e+01 | 6.23e+02 | 9.29e+00 | 5.43e+02 | 9.09e+00 | | chr9 | 72658496 | 72841888 | uc004ahm.2 | 0.4024 | + | MAMDC2 | protein_coding | 5.50e-02 | 1.30e-07 | 1.51e-02 | 4.76e-04 | 2.16e-02 | 0.1845 | -2.437921 | 0.1426 | -2.810100 | 4.66e+02 | 8.87e+00 | NA | NA | NA | NA | 0 | 0 | 5.26e+02 | 9.04e+00 | NA | NA | NA | NA | 0 | 0 | 8.60e+01 | 6.44e+00 | NA | NA | NA | NA | 0 | 0 | 7.50e+01 | 6.25e+00 | NA | NA | NA | NA | 0 | 0 | 4.66e+02 | 8.87e+00 | 5.26e+02 | 9.04e+00 | 8.60e+01 | 6.44e+00 | 7.50e+01 | 6.25e+00 | | chr17 | 79989531 | 79992080 | uc002kdf.3 | 0.6855 | + | RAC3 | protein_coding | 4.24e-02 | 2.45e-07 | 1.08e-02 | 4.82e-04 | 2.17e-02 | 0.1973 | -2.341359 | 0.1526 | -2.712243 | 5.98e+02 | 9.23e+00 | NA | NA | NA | NA | 0 | 0 | 6.75e+02 | 9.40e+00 | NA | NA | NA | NA | 0 | 0 | 1.18e+02 | 6.89e+00 | NA | NA | NA | NA | 0 | 0 | 1.03e+02 | 6.70e+00 | NA | NA | NA | NA | 0 | 0 | 5.98e+02 | 9.23e+00 | 6.75e+02 | 9.40e+00 | 1.18e+02 | 6.89e+00 | 1.03e+02 | 6.70e+00 | | chr17 | 7123149 | 7128586 | uc002gev.4 | 0.5811 | + | ACADVL | protein_coding | 1.12e-02 | 4.20e-05 | 2.39e-04 | 4.83e-04 | 2.17e-02 | 0.3017 | -1.728938 | 0.2328 | -2.103017 | 2.73e+04 | 1.47e+01 | NA | NA | NA | NA | 0 | 0 | 3.08e+04 | 1.49e+01 | NA | NA | NA | NA | 0 | 0 | 8.24e+03 | 1.30e+01 | NA | NA | NA | NA | 0 | 0 | 7.17e+03 | 1.28e+01 | NA | NA | NA | NA | 0 | 0 | 2.73e+04 | 1.47e+01 | 3.08e+04 | 1.49e+01 | 8.24e+03 | 1.30e+01 | 7.17e+03 | 1.28e+01 | | chr19 | 51728334 | 51743274 | uc002pwa.2 | 0.4344 | + | CD33 | protein_coding | 3.14e-02 | 5.91e-07 | 6.89e-03 | 5.04e-04 | 2.26e-02 | 4.6389 | 2.213779 | 3.5813 | 1.840476 | 1.80e+02 | 7.50e+00 | NA | NA | NA | NA | 0 | 0 | 2.03e+02 | 7.67e+00 | NA | NA | NA | NA | 0 | 0 | 8.35e+02 | 9.71e+00 | NA | NA | NA | NA | 0 | 0 | 7.27e+02 | 9.51e+00 | NA | NA | NA | NA | 0 | 0 | 1.80e+02 | 7.50e+00 | 2.03e+02 | 7.67e+00 | 8.35e+02 | 9.71e+00 | 7.27e+02 | 9.51e+00 | | chr13 | 110959630 | 111165373 | uc001vqx.3 | 0.4775 | + | COL4A2 | protein_coding | 1.31e-02 | 4.08e-05 | 2.49e-04 | 5.10e-04 | 2.27e-02 | 0.3006 | -1.734107 | 0.2320 | -2.108007 | 1.13e+04 | 1.35e+01 | NA | NA | NA | NA | 0 | 0 | 1.27e+04 | 1.36e+01 | NA | NA | NA | NA | 0 | 0 | 3.38e+03 | 1.17e+01 | NA | NA | NA | NA | 0 | 0 | 2.95e+03 | 1.15e+01 | NA | NA | NA | NA | 0 | 0 | 1.13e+04 | 1.35e+01 | 1.27e+04 | 1.36e+01 | 3.38e+03 | 1.17e+01 | 2.95e+03 | 1.15e+01 | | chrX | 106183963 | 106243474 | uc004emu.4 | 0.3906 | - | MORC4 | protein_coding | 1.56e-02 | 1.13e-05 | 8.00e-04 | 5.21e-04 | 2.31e-02 | 0.2722 | -1.877017 | 0.2101 | -2.250995 | 3.02e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 3.41e+03 | 1.17e+01 | NA | NA | NA | NA | 0 | 0 | 8.23e+02 | 9.69e+00 | NA | NA | NA | NA | 0 | 0 | 7.17e+02 | 9.49e+00 | NA | NA | NA | NA | 0 | 0 | 3.02e+03 | 1.16e+01 | 3.41e+03 | 1.17e+01 | 8.23e+02 | 9.69e+00 | 7.17e+02 | 9.49e+00 | | chr1 | 27650364 | 27653016 | uc021oju.1 | 0.4712 | + | ACTG1P20 | processed_pseudogene | 5.29e-02 | 2.30e-07 | 1.31e-02 | 5.42e-04 | 2.39e-02 | 5.0680 | 2.341405 | 3.9224 | 1.971742 | 1.03e+02 | 6.70e+00 | NA | NA | NA | NA | 0 | 0 | 1.16e+02 | 6.87e+00 | NA | NA | NA | NA | 0 | 0 | 5.22e+02 | 9.03e+00 | NA | NA | NA | NA | 0 | 0 | 4.55e+02 | 8.83e+00 | NA | NA | NA | NA | 0 | 0 | 1.03e+02 | 6.70e+00 | 1.16e+02 | 6.87e+00 | 5.22e+02 | 9.03e+00 | 4.55e+02 | 8.83e+00 | | chr21 | 47401662 | 47424963 | uc002zhu.1 | 0.6466 | + | COL6A1 | protein_coding | 1.41e-02 | 3.11e-05 | 3.64e-04 | 5.43e-04 | 2.39e-02 | 0.2943 | -1.764700 | 0.2271 | -2.138633 | 6.56e+03 | 1.27e+01 | NA | NA | NA | NA | 0 | 0 | 7.41e+03 | 1.29e+01 | NA | NA | NA | NA | 0 | 0 | 1.93e+03 | 1.09e+01 | NA | NA | NA | NA | 0 | 0 | 1.68e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 6.56e+03 | 1.27e+01 | 7.41e+03 | 1.29e+01 | 1.93e+03 | 1.09e+01 | 1.68e+03 | 1.07e+01 | | chr12 | 102406716 | 102455899 | uc010svw.2 | 0.3633 | - | WASHC3 | protein_coding | 1.80e-02 | 5.64e-06 | 1.60e-03 | 5.46e-04 | 2.39e-02 | 0.2577 | -1.956512 | 0.1990 | -2.329518 | 2.03e+03 | 1.10e+01 | NA | NA | NA | NA | 0 | 0 | 2.29e+03 | 1.12e+01 | NA | NA | NA | NA | 0 | 0 | 5.22e+02 | 9.03e+00 | NA | NA | NA | NA | 0 | 0 | 4.55e+02 | 8.83e+00 | NA | NA | NA | NA | 0 | 0 | 2.03e+03 | 1.10e+01 | 2.29e+03 | 1.12e+01 | 5.22e+02 | 9.03e+00 | 4.55e+02 | 8.83e+00 | | chr6 | 26156558 | 26157343 | uc003ngq.3 | 0.6043 | + | HIST1H1E | protein_coding | 3.95e-02 | 4.85e-07 | 9.06e-03 | 5.58e-04 | 2.43e-02 | 0.2101 | -2.250543 | 0.1617 | -2.628200 | 6.90e+02 | 9.43e+00 | NA | NA | NA | NA | 0 | 0 | 7.79e+02 | 9.61e+00 | NA | NA | NA | NA | 0 | 0 | 1.45e+02 | 7.19e+00 | NA | NA | NA | NA | 0 | 0 | 1.26e+02 | 6.99e+00 | NA | NA | NA | NA | 0 | 0 | 6.90e+02 | 9.43e+00 | 7.79e+02 | 9.61e+00 | 1.45e+02 | 7.19e+00 | 1.26e+02 | 6.99e+00 | | chr1 | 21922707 | 21978348 | uc001bew.3 | 0.5677 | - | RAP1GAP | protein_coding | 4.54e-02 | 4.12e-07 | 1.05e-02 | 5.82e-04 | 2.52e-02 | 4.8281 | 2.271463 | 3.7361 | 1.901537 | 1.28e+02 | 7.01e+00 | NA | NA | NA | NA | 0 | 0 | 1.44e+02 | 7.18e+00 | NA | NA | NA | NA | 0 | 0 | 6.18e+02 | 9.27e+00 | NA | NA | NA | NA | 0 | 0 | 5.38e+02 | 9.07e+00 | NA | NA | NA | NA | 0 | 0 | 1.28e+02 | 7.01e+00 | 1.44e+02 | 7.18e+00 | 6.18e+02 | 9.27e+00 | 5.38e+02 | 9.07e+00 | | chr5 | 172483354 | 172566291 | uc003mch.3 | 0.4108 | + | CREBRF | protein_coding | 2.45e-02 | 2.10e-06 | 3.86e-03 | 5.84e-04 | 2.52e-02 | 4.1852 | 2.065291 | 3.2328 | 1.692800 | 2.97e+02 | 8.22e+00 | NA | NA | NA | NA | 0 | 0 | 3.35e+02 | 8.39e+00 | NA | NA | NA | NA | 0 | 0 | 1.24e+03 | 1.03e+01 | NA | NA | NA | NA | 0 | 0 | 1.08e+03 | 1.01e+01 | NA | NA | NA | NA | 0 | 0 | 2.97e+02 | 8.22e+00 | 3.35e+02 | 8.39e+00 | 1.24e+03 | 1.03e+01 | 1.08e+03 | 1.01e+01 | | chr10 | 3109711 | 3178997 | uc001igp.3 | 0.5106 | + | PFKP | protein_coding | 1.46e-02 | 5.93e-05 | 2.49e-04 | 6.00e-04 | 2.57e-02 | 0.3089 | -1.694732 | 0.2384 | -2.068793 | 1.28e+04 | 1.36e+01 | NA | NA | NA | NA | 0 | 0 | 1.45e+04 | 1.38e+01 | NA | NA | NA | NA | 0 | 0 | 3.96e+03 | 1.19e+01 | NA | NA | NA | NA | 0 | 0 | 3.44e+03 | 1.18e+01 | NA | NA | NA | NA | 0 | 0 | 1.28e+04 | 1.36e+01 | 1.45e+04 | 1.38e+01 | 3.96e+03 | 1.19e+01 | 3.44e+03 | 1.18e+01 | | chr12 | 49578577 | 49583107 | uc001rtp.4 | 0.4860 | - | TUBA1A | protein_coding | 1.41e-02 | 6.31e-05 | 2.44e-04 | 6.01e-04 | 2.57e-02 | 0.3105 | -1.687329 | 0.2396 | -2.061360 | 1.76e+04 | 1.41e+01 | NA | NA | NA | NA | 0 | 0 | 1.99e+04 | 1.43e+01 | NA | NA | NA | NA | 0 | 0 | 5.48e+03 | 1.24e+01 | NA | NA | NA | NA | 0 | 0 | 4.77e+03 | 1.22e+01 | NA | NA | NA | NA | 0 | 0 | 1.76e+04 | 1.41e+01 | 1.99e+04 | 1.43e+01 | 5.48e+03 | 1.24e+01 | 4.77e+03 | 1.22e+01 | | chr12 | 10851675 | 10875953 | uc001qyt.3 | 0.3909 | - | YBX3 | protein_coding | 1.58e-02 | 3.34e-05 | 4.21e-04 | 6.05e-04 | 2.58e-02 | 3.3816 | 1.757718 | 2.6095 | 1.383775 | 1.62e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 1.83e+03 | 1.08e+01 | NA | NA | NA | NA | 0 | 0 | 5.48e+03 | 1.24e+01 | NA | NA | NA | NA | 0 | 0 | 4.78e+03 | 1.22e+01 | NA | NA | NA | NA | 0 | 0 | 1.62e+03 | 1.07e+01 | 1.83e+03 | 1.08e+01 | 5.48e+03 | 1.24e+01 | 4.78e+03 | 1.22e+01 | | chr1 | 160709076 | 160724601 | uc001fwq.3 | 0.4405 | + | SLAMF7 | protein_coding | 2.09e-02 | 4.81e-06 | 2.26e-03 | 6.10e-04 | 2.59e-02 | 3.9178 | 1.970047 | 3.0263 | 1.597563 | 4.38e+02 | 8.78e+00 | NA | NA | NA | NA | 0 | 0 | 4.94e+02 | 8.95e+00 | NA | NA | NA | NA | 0 | 0 | 1.72e+03 | 1.07e+01 | NA | NA | NA | NA | 0 | 0 | 1.50e+03 | 1.05e+01 | NA | NA | NA | NA | 0 | 0 | 4.38e+02 | 8.78e+00 | 4.94e+02 | 8.95e+00 | 1.72e+03 | 1.07e+01 | 1.50e+03 | 1.05e+01 | | chr2 | 18059944 | 18114225 | uc002rcw.3 | 0.4152 | + | KCNS3 | protein_coding | 6.47e-02 | 2.22e-07 | 1.68e-02 | 6.22e-04 | 2.63e-02 | 0.1899 | -2.396450 | 0.1460 | -2.775519 | 4.37e+02 | 8.77e+00 | NA | NA | NA | NA | 0 | 0 | 4.93e+02 | 8.95e+00 | NA | NA | NA | NA | 0 | 0 | 8.30e+01 | 6.39e+00 | NA | NA | NA | NA | 0 | 0 | 7.20e+01 | 6.19e+00 | NA | NA | NA | NA | 0 | 0 | 4.37e+02 | 8.77e+00 | 4.93e+02 | 8.95e+00 | 8.30e+01 | 6.39e+00 | 7.20e+01 | 6.19e+00 | | chr11 | 65190268 | 65212028 | uc010rog.2 | 0.4352 | + | NEAT1 | lincRNA | 1.46e-02 | 7.61e-05 | 2.44e-04 | 6.47e-04 | 2.71e-02 | 3.1752 | 1.666860 | 2.4500 | 1.292782 | 7.48e+03 | 1.29e+01 | NA | NA | NA | NA | 0 | 0 | 8.44e+03 | 1.30e+01 | NA | NA | NA | NA | 0 | 0 | 2.37e+04 | 1.45e+01 | NA | NA | NA | NA | 0 | 0 | 2.07e+04 | 1.43e+01 | NA | NA | NA | NA | 0 | 0 | 7.48e+03 | 1.29e+01 | 8.44e+03 | 1.30e+01 | 2.37e+04 | 1.45e+01 | 2.07e+04 | 1.43e+01 | | chr4 | 185615218 | 185655286 | uc003iwq.3 | 0.3999 | - | CENPU | protein_coding | 2.02e-02 | 7.55e-06 | 1.79e-03 | 6.49e-04 | 2.71e-02 | 0.2628 | -1.928209 | 0.2029 | -2.301216 | 1.96e+03 | 1.09e+01 | NA | NA | NA | NA | 0 | 0 | 2.21e+03 | 1.11e+01 | NA | NA | NA | NA | 0 | 0 | 5.15e+02 | 9.01e+00 | NA | NA | NA | NA | 0 | 0 | 4.49e+02 | 8.81e+00 | NA | NA | NA | NA | 0 | 0 | 1.96e+03 | 1.09e+01 | 2.21e+03 | 1.11e+01 | 5.15e+02 | 9.01e+00 | 4.49e+02 | 8.81e+00 | | chr1 | 179809101 | 179846941 | uc001gnk.3 | 0.3885 | - | TOR1AIP2 | protein_coding | 2.67e-02 | 2.51e-06 | 4.11e-03 | 6.51e-04 | 2.71e-02 | 4.1419 | 2.050282 | 3.1994 | 1.677795 | 2.89e+02 | 8.18e+00 | NA | NA | NA | NA | 0 | 0 | 3.26e+02 | 8.35e+00 | NA | NA | NA | NA | 0 | 0 | 1.20e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 1.04e+03 | 1.00e+01 | NA | NA | NA | NA | 0 | 0 | 2.89e+02 | 8.18e+00 | 3.26e+02 | 8.35e+00 | 1.20e+03 | 1.02e+01 | 1.04e+03 | 1.00e+01 | | chr4 | 170015406 | 170192249 | uc003isa.1 | 0.3927 | - | SH3RF1 | protein_coding | 3.11e-02 | 1.64e-06 | 5.48e-03 | 6.54e-04 | 2.71e-02 | 4.2857 | 2.099536 | 3.3027 | 1.723638 | 2.31e+02 | 7.86e+00 | NA | NA | NA | NA | 0 | 0 | 2.61e+02 | 8.03e+00 | NA | NA | NA | NA | 0 | 0 | 9.90e+02 | 9.95e+00 | NA | NA | NA | NA | 0 | 0 | 8.62e+02 | 9.75e+00 | NA | NA | NA | NA | 0 | 0 | 2.31e+02 | 7.86e+00 | 2.61e+02 | 8.03e+00 | 9.90e+02 | 9.95e+00 | 8.62e+02 | 9.75e+00 | | chr6 | 26368405 | 26378540 | uc010jqi.2 | 0.4586 | + | BTN3A2 | protein_coding | 4.20e-02 | 7.74e-07 | 9.06e-03 | 6.65e-04 | 2.75e-02 | 0.2158 | -2.212050 | 0.1669 | -2.583126 | 6.95e+02 | 9.44e+00 | NA | NA | NA | NA | 0 | 0 | 7.85e+02 | 9.62e+00 | NA | NA | NA | NA | 0 | 0 | 1.50e+02 | 7.24e+00 | NA | NA | NA | NA | 0 | 0 | 1.31e+02 | 7.04e+00 | NA | NA | NA | NA | 0 | 0 | 6.95e+02 | 9.44e+00 | 7.85e+02 | 9.62e+00 | 1.50e+02 | 7.24e+00 | 1.31e+02 | 7.04e+00 | | chr16 | 3775055 | 3930121 | uc002cvv.3 | 0.4486 | - | CREBBP | protein_coding | 1.78e-02 | 2.45e-05 | 7.06e-04 | 6.76e-04 | 2.78e-02 | 3.4658 | 1.793180 | 2.6734 | 1.418676 | 1.05e+03 | 1.00e+01 | NA | NA | NA | NA | 0 | 0 | 1.19e+03 | 1.02e+01 | NA | NA | NA | NA | 0 | 0 | 3.65e+03 | 1.18e+01 | NA | NA | NA | NA | 0 | 0 | 3.18e+03 | 1.16e+01 | NA | NA | NA | NA | 0 | 0 | 1.05e+03 | 1.00e+01 | 1.19e+03 | 1.02e+01 | 3.65e+03 | 1.18e+01 | 3.18e+03 | 1.16e+01 |
Download the DEG result list for sample005_vs_sample006.Download the whole result list for sample005_vs_sample006.Download the raw read counts table for the experiment.Download the normalized read counts table for the experiment.
References
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